Gene CPR_0149 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPR_0149 
Symbol 
ID4205629 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens SM101 
KingdomBacteria 
Replicon accessionNC_008262 
Strand+ 
Start bp183066 
End bp183743 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content29% 
IMG OID642564704 
Producthypothetical protein 
Protein accessionYP_697486 
Protein GI110803407 
COG category[S] Function unknown 
COG ID[COG0398] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGAAGA AGAGTTTAAT AATTTTAAGT ATAATAGTTT TAATATTTGT ATGTATAACT 
CTTTATTTAA CTAGAGAACA TATAATGGTT TTTTATAAAT TAATTACTAA TGGTGAAGTT 
ATAAAGAGTT ATCTTGAAAG GTTTGGCCCT TGGGCAGCTA TAATATTTTT TATCTTTCAA 
ATATTACAGG TAGTTATATT CTTTATTCCA GGAGAGGTTA TACAAGCTGC TGGGGGGTAT 
ATATTTGGTG CCTTAGGAGG AACTTTACTT TCATTTTTCG GCATAGCAGT TGGATCTGCA 
ATATTATTTT ACATATGTCA AAAGTTTGGA AAGAAGCTAG TACAAAGGTT TGTGCCTAAG 
GATATGTATG ATAAATTAGA AAAGATTTTA AATAGCCCTA AGTTTAAACT TATATTGGTA 
ATACTATTCT TTTTACCAGG GGCACCTAAA GATTCACTTA TTATGGTTTG TGCCTTAAGT 
AACATAACCA TAGGACACTT TATAATATTC TCTATGATAG GAAGAATACC AGCCTTAGTT 
GCATCTTCTT TTATGGGAGC AAATTTAGCA GAGGGTAATA TTGTAGGAGT AATAATTATT 
GGTGTAATAG CCTTAATAGC TTGTACTTTA GGGGTTATAT TCAGAAAAGA TATATTTAAG 
TACATGGAAA AACTTTAA
 
Protein sequence
MKKKSLIILS IIVLIFVCIT LYLTREHIMV FYKLITNGEV IKSYLERFGP WAAIIFFIFQ 
ILQVVIFFIP GEVIQAAGGY IFGALGGTLL SFFGIAVGSA ILFYICQKFG KKLVQRFVPK 
DMYDKLEKIL NSPKFKLILV ILFFLPGAPK DSLIMVCALS NITIGHFIIF SMIGRIPALV 
ASSFMGANLA EGNIVGVIII GVIALIACTL GVIFRKDIFK YMEKL