Gene CPR_0115 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPR_0115 
Symbol 
ID4205247 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens SM101 
KingdomBacteria 
Replicon accessionNC_008262 
Strand
Start bp144871 
End bp146121 
Gene Length1251 bp 
Protein Length416 aa 
Translation table11 
GC content25% 
IMG OID642564670 
Producthypothetical protein 
Protein accessionYP_697452 
Protein GI110803047 
COG category[S] Function unknown 
COG ID[COG4640] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATTTTT GTAATAAATG CGGTTCAAAA TTAATAAATG GAGTTTGTCC CAATTGCTCA 
AAAATAAAAA AAAACAAGAA AAAATCTAAA ATTATAATAA TAAGCCTAGT TCTTATTGTT
GTAATATTTT CTGGTGTATT CTTTTACTTA AAATCAACAG TTAAATCTGA AAAAGAAATA
GCACTTTCAT TTTCAAATTC AATTTCCTCT TCAAATCCAG AGGAACTTAG TAAAATACTT
TATTGTAATG ATAGCTCTTT ACCAATAAAT AAAAGCAACT CTACTATTCT AATAGATTAC
TTTAATCAAA ATCCATCAAA ATTTTCTTCA ATAAACGACG ATTTTAAAAA GGGAAATTAT
ACGGACACAG ACTCCCCCTT ATCTATAGAA GAGGTTAGAA AAGATTTCTT TTTAATACCT
GTTTATAAAG TAGTTGTAAA ACCAAGCTTT ATAAAGGTAA AAACTGATTT AAAAGATGCA
AAAGTTCAAA TAGGAGATGA AACTTTTGGA GATTTAACAA AAAAAGATGA GTTAGGCCCT
TTAATGCCTG GAAATTATAC TATTAAATCC GAAATATCAA ATTCATATTT AAACAAATCT
GAAAATATAG AGGTTAACAC TTTTAAATCT TCTAACCAAG AAATAAGTAT ATTTGATAAC
TTTATTAAAG TTAATATTAC TAGTGATATT CCGGATGCTG AATTATATGT AAATAATAAA
GATACTGGAG TAAAAATTAA AGATGCTAAA ACCTTTGGTC CAATTGATCC TAATAGTATT
ATTTACGGAG TAGCAAAAGA TGGAGATAAA AAAATAATAA GTAACAAATA TGATGTAAAT
TATTCAAAAA ATATAAATAT AAACTTTGCT GAAGCTAAAG CCTCAGAAGC TAATTTCAAA
AAAGATCTTT ATGTTTTATT AAGTAATTAC TCTAATGATT TTGCTTATGC TGTTAATACA
AATAGTTTTA ATTATATAGA AAACTACCTT GAATTTGACA GTCCTATTTA CAATAAACAA
AAGAAAGTTG TCCCTGAAAT ACATTCTAAA GATATTAGGG AAAACTTTGA AAGCACTGAG
ATATTAAATT ATACATTTAA TAATGATACA AATACTGGTG AAGTTACTTG TAATGAAATT
TATTCTATAG GTAAAGGAAT TAATGTTCCT AAGCGTCAAG AATTTAAAAA TACTTATACC
TTTAAAAAAC TATCTAATGG TTCATTAGTT CTTACTGATA TAAAAGATTA A
 
Protein sequence
MNFCNKCGSK LINGVCPNCS KIKKNKKKSK IIIISLVLIV VIFSGVFFYL KSTVKSEKEI 
ALSFSNSISS SNPEELSKIL YCNDSSLPIN KSNSTILIDY FNQNPSKFSS INDDFKKGNY
TDTDSPLSIE EVRKDFFLIP VYKVVVKPSF IKVKTDLKDA KVQIGDETFG DLTKKDELGP
LMPGNYTIKS EISNSYLNKS ENIEVNTFKS SNQEISIFDN FIKVNITSDI PDAELYVNNK
DTGVKIKDAK TFGPIDPNSI IYGVAKDGDK KIISNKYDVN YSKNININFA EAKASEANFK
KDLYVLLSNY SNDFAYAVNT NSFNYIENYL EFDSPIYNKQ KKVVPEIHSK DIRENFESTE
ILNYTFNNDT NTGEVTCNEI YSIGKGINVP KRQEFKNTYT FKKLSNGSLV LTDIKD