Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPR_0105 |
Symbol | |
ID | 4205248 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens SM101 |
Kingdom | Bacteria |
Replicon accession | NC_008262 |
Strand | + |
Start bp | 134261 |
End bp | 135058 |
Gene Length | 798 bp |
Protein Length | 265 aa |
Translation table | 11 |
GC content | 28% |
IMG OID | 642564660 |
Product | hypothetical protein |
Protein accession | YP_697442 |
Protein GI | 110803048 |
COG category | [S] Function unknown |
COG ID | [COG5523] Predicted integral membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATAGAA AAGAGATAAA AAGTATTGCT AAGTCTAAGT TAAAGGGAAG ATGGTTTAAT ATTGTCTTAT TAACTTTAAT CATAGCAATA ATTGAATTTG GAGCAAGTGA GATTATTGGA AGAACAGAAG GAATAACTTC TAATATTTTA AACATAGCTA ATAACTTTTT ATTAATGCCA GCCATAACGG CTTCAGGGAT TATATACACA ATTAAATTTG TTAAGAGTAA TGAAGTAGTA TCTTTAAGTT ATGCTATTCC AAGCATTAAA ACTTGGGGAA GATTTATAAT GAGTATGATA GTTACTATGA TCTTTAGTAT TCCTATACTT TTAGTTGTGT TTTTAGGAAA TATATTTTTA GTGTTATCTA TAACATCATT ACATAGTGCA ATGCTTACTG GCCAAATATC TATGAATCCT ATGATAGGAA TTTGGGGAGT AGTATTTTTA ATAGTTATAT TAGTATTAAT TTTAGCTGCT ATAGTAGGAA TTTTATTATT CCCATTACCA TATTTAATGG CTGAAGATAC CTGTGGAATA TGGGAAGCTG TTAAGAGAAG CTTTAAAATA ATGAATGGTC ATAAATGGGA ACTATTTATT ATGGGACTTA GCTTCTTAGG ATGGTTAATA TTATCAGCAT TAACTTTTGG AATAGGATTA TTATGGCTTT TACCATATAT TCAAGTTACC TTGAGAATAT ATTATCTTTC AATTACAGGA AGAGCATTAG AAATAGGAAA ATATGAATTA AATCAGAATA TTGAAGTTAA AGAAGAAGAT TTCGAATTTA GAGATTAG
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Protein sequence | MNRKEIKSIA KSKLKGRWFN IVLLTLIIAI IEFGASEIIG RTEGITSNIL NIANNFLLMP AITASGIIYT IKFVKSNEVV SLSYAIPSIK TWGRFIMSMI VTMIFSIPIL LVVFLGNIFL VLSITSLHSA MLTGQISMNP MIGIWGVVFL IVILVLILAA IVGILLFPLP YLMAEDTCGI WEAVKRSFKI MNGHKWELFI MGLSFLGWLI LSALTFGIGL LWLLPYIQVT LRIYYLSITG RALEIGKYEL NQNIEVKEED FEFRD
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