Gene CPR_0105 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPR_0105 
Symbol 
ID4205248 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens SM101 
KingdomBacteria 
Replicon accessionNC_008262 
Strand
Start bp134261 
End bp135058 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content28% 
IMG OID642564660 
Producthypothetical protein 
Protein accessionYP_697442 
Protein GI110803048 
COG category[S] Function unknown 
COG ID[COG5523] Predicted integral membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATAGAA AAGAGATAAA AAGTATTGCT AAGTCTAAGT TAAAGGGAAG ATGGTTTAAT 
ATTGTCTTAT TAACTTTAAT CATAGCAATA ATTGAATTTG GAGCAAGTGA GATTATTGGA
AGAACAGAAG GAATAACTTC TAATATTTTA AACATAGCTA ATAACTTTTT ATTAATGCCA
GCCATAACGG CTTCAGGGAT TATATACACA ATTAAATTTG TTAAGAGTAA TGAAGTAGTA
TCTTTAAGTT ATGCTATTCC AAGCATTAAA ACTTGGGGAA GATTTATAAT GAGTATGATA
GTTACTATGA TCTTTAGTAT TCCTATACTT TTAGTTGTGT TTTTAGGAAA TATATTTTTA
GTGTTATCTA TAACATCATT ACATAGTGCA ATGCTTACTG GCCAAATATC TATGAATCCT
ATGATAGGAA TTTGGGGAGT AGTATTTTTA ATAGTTATAT TAGTATTAAT TTTAGCTGCT
ATAGTAGGAA TTTTATTATT CCCATTACCA TATTTAATGG CTGAAGATAC CTGTGGAATA
TGGGAAGCTG TTAAGAGAAG CTTTAAAATA ATGAATGGTC ATAAATGGGA ACTATTTATT
ATGGGACTTA GCTTCTTAGG ATGGTTAATA TTATCAGCAT TAACTTTTGG AATAGGATTA
TTATGGCTTT TACCATATAT TCAAGTTACC TTGAGAATAT ATTATCTTTC AATTACAGGA
AGAGCATTAG AAATAGGAAA ATATGAATTA AATCAGAATA TTGAAGTTAA AGAAGAAGAT
TTCGAATTTA GAGATTAG
 
Protein sequence
MNRKEIKSIA KSKLKGRWFN IVLLTLIIAI IEFGASEIIG RTEGITSNIL NIANNFLLMP 
AITASGIIYT IKFVKSNEVV SLSYAIPSIK TWGRFIMSMI VTMIFSIPIL LVVFLGNIFL
VLSITSLHSA MLTGQISMNP MIGIWGVVFL IVILVLILAA IVGILLFPLP YLMAEDTCGI
WEAVKRSFKI MNGHKWELFI MGLSFLGWLI LSALTFGIGL LWLLPYIQVT LRIYYLSITG
RALEIGKYEL NQNIEVKEED FEFRD