Gene CPR_0096 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPR_0096 
SymbolfusA 
ID4204734 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens SM101 
KingdomBacteria 
Replicon accessionNC_008262 
Strand
Start bp123190 
End bp125280 
Gene Length2091 bp 
Protein Length696 aa 
Translation table11 
GC content31% 
IMG OID642564651 
Productelongation factor G 
Protein accessionYP_697433 
Protein GI110802289 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0480] Translation elongation factors (GTPases) 
TIGRFAM ID[TIGR00231] small GTP-binding protein domain
[TIGR00484] translation elongation factor EF-G 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGGAGT ATAAAATTGA GAATTTAAGA AATATAGGTA TTATAGGACA TAGTGATTCA 
GGTAAAACTG CATTATCAGA AGCTTTACTT TATTATACAA AAACTACTGA TAGATTAGGA
ACTTGTGAAG ATGGAAATAC AATAAGTGAT TATGATCAAG AAGAGAAAAA AAGAAAGATA
TCACTAGCCT TATCTATTAT TCCTTTTGAA TATGATGGAA CTAAGATTAA TATATTGGAT
ACTCCAGGTT ATTTTGATTT TGTTGGAGAG CAAATAGAAG GTGTTAAGGC TGCTGACTCT
GCAATTATAA CTGTATGCGG AGTGACTGGA GTTCAAGTTG GAACTGAAAA AGCCTGGGAA
TGCTGTGAAA AAGAAAAATT ACCAAGAGCC TTTTTTATAA ATAAATTAGA TAGAGAAAAC
TCAAATTTTG ATAAGGTATT AGAAAATATA AGAAATATTT TTGGAAACAA AGTAATTCCT
ACTCAATATC CATTAGGAAA AGAAAAGGAG TTTAAGGGAA TTGTAAATCT TATAACTGAA
AAAGCTTTTG AGTATGATAA AAAATCAGGA AAAATAAATA AGATAGAAAT ACCTAATGAA
GTAAAAGATA AGGTCAATGA GTATAGAACT TATTTAATGG AATCTGTAGC TGAAACTGAT
GAGGAATTAC TTGATAAATA TTTATCTGAA GGAGAGCTTA CAGTAGATGA AATCTATAAA
GGACTTTCTA TTGGATTTGA AGAAGGAGAT ATAGCTCCAG TTATGTGTGG AAGTTCAGTA
TCAATAGTTG GTATGAAAAG CCTATTAGAT TCAATTAAAG GATATTTCCC ATCACCATAT
ATAAGCAAAG CTAAAGTTGC TATTGATAGC AATAATAAAG AAATATTAGT TAAGTCAAAT
AAAGATATGC CATTTTCTGC ATTTGTATTT AAAACAATTG CTGATCCTTT TGTAGGAAAG
CTTTCAATAT TTAAGGTGCA AACAGGAGAG CTAACAACTG ATAAGATAAT TATAAATTCA
AAAAATAATA AGATAGAAAA AGTTAGTTCC TTATGCTTTT TAAGAGGTAA AAATCAAATA
CAAACAAATA AAATAGGTGC TGGAGATATA GGAGCTATTA CAAAACTTCA ATATACTTCA
ACTGGTGATA CTCTTTGTGA AAGTAACTTT AAGATTGCTT ATGAAGAATT TGAGTTTCCA
GAGGCAGTTA TGACTATGGC AGTATTACCA AAAAGTAAAT GTGATGAAGA AAAAATTTCT
CAAGGACTTT CTAAACTTCT AGATGAAGAT CCAACATTTA AGGTTTCTAG AGATCAAGAA
AATGCAGAAA CCTTAGTTTC TGGTATTGGA GAGACACATG TAGAGGTTTT AGCTAGTAAA
TTAAAGAGTA AATTTGGAAT TGATGTAATT CTTCAAGATC CTAAGATTCC CTATAGAGAA
ACTATAAAAG GTAGTTCTGA TGTACAAGGA AAGCATAAAA AACAATCTGG AGGCCATGGT
CAATATGGAG ATGTAAAAAT TAAATTTGAG CCTAGAAGAG ACGGTGAGCT TGATTTAGAA
TTTGTGGATA AGGTTGTTGG AGGAGTTGTG CCTAGAAACT ATATACCAGC AGTAGAAAAA
GGATTAAGAG ATTGTTTAAA GAAAGGGGTT TTAGCAGGTT ATCCTGTAAT AGGAATTAAG
GCTACATTAC ATGATGGATC ATATCACCCT GTAGATTCAT CAGAAATGGC ATTTAAGGTA
GCTGCTTCAT TAGCATATAA GAAAGGTATG GAGAATGCAA AACCTGTTAT ATTAGAGCCT
ATTATGAAGG TAAAAATAAT AATTCCAGAT GAATACATGG GAGATATAAT TAGTGATATA
AATAAGAAAA GAGGAAGAGT AATTGGAATG GAACCAGAAG GTAATAATGA AAAAGTTATA
GCTGATATTC CTTTATCAGA AATGTTTAAG TATGCTACTG ATTTACGTTC AATGACTCAA
GGAAGAGGAA GCTTTAGCAT GGAATTTGAA AAATATGAGG AAGTTCCAAG TACAGAGGTA
GATAAAATAA TAGAAGATGC AAAGAAAATA AAAGAAGCTA AGGAAGCTTA A
 
Protein sequence
MKEYKIENLR NIGIIGHSDS GKTALSEALL YYTKTTDRLG TCEDGNTISD YDQEEKKRKI 
SLALSIIPFE YDGTKINILD TPGYFDFVGE QIEGVKAADS AIITVCGVTG VQVGTEKAWE
CCEKEKLPRA FFINKLDREN SNFDKVLENI RNIFGNKVIP TQYPLGKEKE FKGIVNLITE
KAFEYDKKSG KINKIEIPNE VKDKVNEYRT YLMESVAETD EELLDKYLSE GELTVDEIYK
GLSIGFEEGD IAPVMCGSSV SIVGMKSLLD SIKGYFPSPY ISKAKVAIDS NNKEILVKSN
KDMPFSAFVF KTIADPFVGK LSIFKVQTGE LTTDKIIINS KNNKIEKVSS LCFLRGKNQI
QTNKIGAGDI GAITKLQYTS TGDTLCESNF KIAYEEFEFP EAVMTMAVLP KSKCDEEKIS
QGLSKLLDED PTFKVSRDQE NAETLVSGIG ETHVEVLASK LKSKFGIDVI LQDPKIPYRE
TIKGSSDVQG KHKKQSGGHG QYGDVKIKFE PRRDGELDLE FVDKVVGGVV PRNYIPAVEK
GLRDCLKKGV LAGYPVIGIK ATLHDGSYHP VDSSEMAFKV AASLAYKKGM ENAKPVILEP
IMKVKIIIPD EYMGDIISDI NKKRGRVIGM EPEGNNEKVI ADIPLSEMFK YATDLRSMTQ
GRGSFSMEFE KYEEVPSTEV DKIIEDAKKI KEAKEA