Gene CPR_0094 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPR_0094 
Symbol 
ID4205549 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens SM101 
KingdomBacteria 
Replicon accessionNC_008262 
Strand
Start bp116548 
End bp117066 
Gene Length519 bp 
Protein Length172 aa 
Translation table11 
GC content21% 
IMG OID642564646 
ProductTetR family transcriptional regulator 
Protein accessionYP_697432 
Protein GI110802978 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCTAAAA TTATAAAAAA TGTAAAAGAA GATTTATTAA CTGAAGGAAA AAAACAATTG 
CTGTCTAATG GATATTTAAA TTTAAATATA AGAAATATAA CTAAGAAATG TAATATAGGT
ACTGGAACCT TCTATAACTA TTTTAAAAAC AAGGAACAAC TTGTTATTGA TATACTATCT
AATGATTGGA CTTCTATTTT AAATATATCT AATGAAATAA TAAAAGAAGA TATTTCATTT
AAAGAAAAAC TAATTTTTAT TTCTAATAAT ATAAATTATT TCTTAAAAAA CTATAGACTT
ATATTTTCAG AGATGGCTAA GCATACCTCT AAAAATCACT ATGTTATAGA GCCAATGTAT
GAAATTTTAG AAAAGCTAAT TGAAATTCAT ATAGAAAAAG GAGAAATCAA TCCCCCTATA
TCCTCAAATA AGTTTGCTTA TTTTCTACTA AATAATCTTA TATTAACATC TCGTTATGAA
TTAACTATAG ATGATCTATT ACTATTATTG AATATATAA
 
Protein sequence
MPKIIKNVKE DLLTEGKKQL LSNGYLNLNI RNITKKCNIG TGTFYNYFKN KEQLVIDILS 
NDWTSILNIS NEIIKEDISF KEKLIFISNN INYFLKNYRL IFSEMAKHTS KNHYVIEPMY
EILEKLIEIH IEKGEINPPI SSNKFAYFLL NNLILTSRYE LTIDDLLLLL NI