Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPR_0094 |
Symbol | |
ID | 4205549 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens SM101 |
Kingdom | Bacteria |
Replicon accession | NC_008262 |
Strand | - |
Start bp | 116548 |
End bp | 117066 |
Gene Length | 519 bp |
Protein Length | 172 aa |
Translation table | 11 |
GC content | 21% |
IMG OID | 642564646 |
Product | TetR family transcriptional regulator |
Protein accession | YP_697432 |
Protein GI | 110802978 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 43 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCTAAAA TTATAAAAAA TGTAAAAGAA GATTTATTAA CTGAAGGAAA AAAACAATTG CTGTCTAATG GATATTTAAA TTTAAATATA AGAAATATAA CTAAGAAATG TAATATAGGT ACTGGAACCT TCTATAACTA TTTTAAAAAC AAGGAACAAC TTGTTATTGA TATACTATCT AATGATTGGA CTTCTATTTT AAATATATCT AATGAAATAA TAAAAGAAGA TATTTCATTT AAAGAAAAAC TAATTTTTAT TTCTAATAAT ATAAATTATT TCTTAAAAAA CTATAGACTT ATATTTTCAG AGATGGCTAA GCATACCTCT AAAAATCACT ATGTTATAGA GCCAATGTAT GAAATTTTAG AAAAGCTAAT TGAAATTCAT ATAGAAAAAG GAGAAATCAA TCCCCCTATA TCCTCAAATA AGTTTGCTTA TTTTCTACTA AATAATCTTA TATTAACATC TCGTTATGAA TTAACTATAG ATGATCTATT ACTATTATTG AATATATAA
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Protein sequence | MPKIIKNVKE DLLTEGKKQL LSNGYLNLNI RNITKKCNIG TGTFYNYFKN KEQLVIDILS NDWTSILNIS NEIIKEDISF KEKLIFISNN INYFLKNYRL IFSEMAKHTS KNHYVIEPMY EILEKLIEIH IEKGEINPPI SSNKFAYFLL NNLILTSRYE LTIDDLLLLL NI
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