Gene CPR_0088 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPR_0088 
Symbol 
ID4205356 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens SM101 
KingdomBacteria 
Replicon accessionNC_008262 
Strand
Start bp104764 
End bp105210 
Gene Length447 bp 
Protein Length148 aa 
Translation table11 
GC content27% 
IMG OID642564637 
Productacetobutylicum phosphotransbutyrylase 
Protein accessionYP_697427 
Protein GI110803021 
COG category[S] Function unknown 
COG ID[COG5652] Predicted integral membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGAATA AAAGAAAAAG AATAATTGCA TGGAGTTTAA TGATATTATG GATGGCTTTT 
ATATTTTTTA TGTCTAGCCA GCCAGGAGAG GTTTCTTCTA AGCAAAGTAA TTTTGTAGTT
GTTTTACTTG ATATGTTTGG AATGAACTTA AATAGTCGTT TCGGTGAATT ATCAACTTAT
ATTATAAGAA AGGGAGCACA CTTTACTGAA TATATGATAC TTTATTTCTT AGCTTTTAAT
CTTTTAAGAT TATATATAAC TAGAAAGATG GCATATATAT ATTCCTTAAT TATAGTATTT
GGATATGCTT GTAGCGATGA ATTCCATCAA TTATTTGTAG AAGGAAGAAG TGGACAGTTT
AAAGATGTTC TTATAGATAC ATCAGGAGGA ATTTTTGGAA GCTTATTAGT TATTTTAAAA
AATAAAATTT TCTCTAATAA AGCTTAA
 
Protein sequence
MENKRKRIIA WSLMILWMAF IFFMSSQPGE VSSKQSNFVV VLLDMFGMNL NSRFGELSTY 
IIRKGAHFTE YMILYFLAFN LLRLYITRKM AYIYSLIIVF GYACSDEFHQ LFVEGRSGQF
KDVLIDTSGG IFGSLLVILK NKIFSNKA