Gene CPR_0079 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPR_0079 
Symbol 
ID4206352 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens SM101 
KingdomBacteria 
Replicon accessionNC_008262 
Strand
Start bp91596 
End bp92918 
Gene Length1323 bp 
Protein Length440 aa 
Translation table11 
GC content31% 
IMG OID642564628 
Productputative amino acid permease 
Protein accessionYP_697418 
Protein GI110803423 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0531] Amino acid transporters 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGAAAAC CTAAATTAAA AAAGGAAATA GGATTGTTTA CGGCTACAGC TTTAGTAGTT 
GGTAATATGA TGGGATCTGG TATATTTATG CTTCCATCTA GTTTAGCAGG TGTGTCTGGT
CCTGGTTCAA CTATAATGGC GTGGTTATTA ACGGGATTAG GTTCTTTGAT TTTGGCATTA
ACGTTTGCTA ACTTAGGTTC AAAAATTCCG AAAACAGGAG GAACTTATGA ATATTCTAGA
CTAGCTTACG GAAATTTTAT GGGATTTATG ACGGCGTGGC TTTATTGGAA TGGATCTTGG
ATTGGAAATG CTACTATTTT TATAGTTATT ACTACTTATT TAGGTGAAGT TATAACAAGT
TTAACTAATT CATCAATAAT AGGTTTCTTA TTCTGTTCTT CTATCTTATG GATTTGTACA
TATATAAATA TAAGAGGAAC AAAATTAGCT GGTAGAGTAG CTTCAGTAAT AACTGTTTTT
AAAGTTTTAT TATTTATATT CTTCATAGTT GTTGGATTAA TTTACTTTGA TCCGTCAAAT
TTAACACCAA TGTTTCCAGA AGGAAAGGGT GTTTCAACTA TTCCTGTAGC AGCATCTTTA
ACTTTATGGG CATTTATGGG CTTAGAAACT GCATCTGTAG CAGGAGGAGA AATAAAAGAT
CCTGAAAAAA ATGTTAAGAG AAGTACTATA TTAGGTATGT TAATTAGTAC TGTTTTATAT
ATATTAATAA GTGTTGTAGC TATGGGAGTT ATGAGTCAAA GTGAATTAGC TTCAAGCACT
GCTCCTATTT CTGATATAAT AGTTAAAGTT TTAAATTTAA AGAGTTTAAA TTTCTTAAAT
ATAGCTATAG CTATTAGTAT TTTAGGTACA GCTATGGGAT GGCTATTATC AACTGCTAGA
GTTGGATATG CTGCTGGAGA GGATGGAATT TTCCCTAGTG TATTTGCTAA GGTACATCCT
AAATATAATA CTCCATATGT AGCTTTGATA ATAGGAAGTA TATTTATAAA TATTATATTC
TTAATGAATT TTACTAAGGG TCTAGCAGGT GCATATAGCT TTATAGTTGT ATTGGCTACT
TTAAGTTATT TGCCAATATA TGCGATTTCA ACTATTGCAG AGATAATACT TATGGTTAAA
GAAGATAAGA AACCTTCATT CAAAAAACAT TTAGGTTTAA TAACAAGATG TTTAATAGGT
TTTGCTTTTG CAATTTGGGC AATATATGCT TCAGGAGCTG AAATAGTAAT GTATGGATTT
ATTTTAATAT TACTAGGAGT TCCGATTTAT GGGTATATGA GCATAAAAAA ACACTTCCGA
TAA
 
Protein sequence
MGKPKLKKEI GLFTATALVV GNMMGSGIFM LPSSLAGVSG PGSTIMAWLL TGLGSLILAL 
TFANLGSKIP KTGGTYEYSR LAYGNFMGFM TAWLYWNGSW IGNATIFIVI TTYLGEVITS
LTNSSIIGFL FCSSILWICT YINIRGTKLA GRVASVITVF KVLLFIFFIV VGLIYFDPSN
LTPMFPEGKG VSTIPVAASL TLWAFMGLET ASVAGGEIKD PEKNVKRSTI LGMLISTVLY
ILISVVAMGV MSQSELASST APISDIIVKV LNLKSLNFLN IAIAISILGT AMGWLLSTAR
VGYAAGEDGI FPSVFAKVHP KYNTPYVALI IGSIFINIIF LMNFTKGLAG AYSFIVVLAT
LSYLPIYAIS TIAEIILMVK EDKKPSFKKH LGLITRCLIG FAFAIWAIYA SGAEIVMYGF
ILILLGVPIY GYMSIKKHFR