| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_0066 |
|---|
| Symbol | mtnN |
|---|
| ID | 4204409 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium perfringens SM101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008262 |
|---|
| Strand | - |
|---|
| Start bp | 70062 |
|---|
| End bp | 70757 |
|---|
| Gene Length | 696 bp |
|---|
| Protein Length | 231 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 642564609 |
|---|
| Product | 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase |
|---|
| Protein accession | YP_697408 |
|---|
| Protein GI | 110802685 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0775] Nucleoside phosphorylase |
|---|
| TIGRFAM ID | [TIGR01704] 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACTTTAG GAATAATCGC CGCTATGAGC GAAGAATTAG AAATTCTTTT AAAAGACATG
GAAGTAAAAT CTAAAGAAAC TAAGGCTAAT ATGACTTTCC ACCAAGGTAC GCTTTGGGGT
CAAGAGGTTG TAGCCGTTGT ATGTGGTATA GGTAAGGTTA ATGCTGCCGT TTGTACTCAA
ATATTAATAA GTGAATACAA AGTTGATAAG GTTATAAACG TTGGTGTTGC TGGTGGTATA
GGCATGGAAA TATATCCTGG GGATGTTGTT ATAGGTAACT CATTAGTTCA ATACGATATG
GACACATCTG CCTTTGGAGA TCCTATAGGA CAAATACCAA GATTAGATAC CTTTGATTTT
AAATGTTCAC AAGAATTAGT TGACCTTTGC GAAGAAGCTT GTAAAGAAAA TGAAGAAATA
AAGAGCTTCA CTGGAAGAAT AGTTACTGGT GACCAATTTG TTGCTAGTGT AGAAAAGGTT
AAATGGTTAG AAGAGGAATT TGGAGCTTCT GCTTGTGAAA TGGAAGGTGG AAGTATAGCT
CACGTTTGTT ACTTAAACAA TATTCCATTC CTTGTTATAA GATCAATATC TGATAATGCA
AATAATGGAG CACATATGGA CTTCGCTGAG TTTACAGCTA TAGGAGTTAA AAACTCTACT
TCAATATTAA AATCAATGAT TTTAAAAATG GCTTAA
|
|---|
| Protein sequence | MTLGIIAAMS EELEILLKDM EVKSKETKAN MTFHQGTLWG QEVVAVVCGI GKVNAAVCTQ
ILISEYKVDK VINVGVAGGI GMEIYPGDVV IGNSLVQYDM DTSAFGDPIG QIPRLDTFDF
KCSQELVDLC EEACKENEEI KSFTGRIVTG DQFVASVEKV KWLEEEFGAS ACEMEGGSIA
HVCYLNNIPF LVIRSISDNA NNGAHMDFAE FTAIGVKNST SILKSMILKM A
|
|---|
| |