Gene CPR_0050 details

Gene Information

• Locus tag: CPR_0050
• ID: 4204602
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Clostridium perfringens SM101
• Kingdom: Bacteria
• Replicon accession: NC_008262
• Strand: +
• Start bp: 57053
• End bp: 57856
• Gene Length: 804 bp
• Protein Length: 267 aa
• Translation table: 11
• GC content: 26%
• IMG OID: 642564593
• Product: hypothetical protein
• Protein accession: YP_697392
• Protein GI: 110802411

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 0.322838
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGAAATATT ATTTTAAAAA CGAATTGAAA AGAGCTTTGT TTGGGAAAAA TGCTATTATA 
TCTTTTTCAA TTACACTAGG TATTTTAATT GCAGCATTTA TGAAGGAGTT TGGATTTGAA 
TCAATAAAGT ATATTTCTCA ATATCCAACT TTTGATGCAA TAGATGCTTT ATTAATTGTA 
ATGTCGAGTA ATATAGTTAT AGTATTTCCA CTATTAGCAA CTATCATATT TTCAGATTCA 
TACTTACAAG AAAAAGAAAG TGGATTTACA AAGTTTATTT ATACAAGGAT GCCATTAAAA 
AAATATGTTT CTATTAAAGT TATAGTAAAT AGTATTTCTA GTGCATTAGT TGCAGGGGCA 
TCAAGCCTTT TTATGCTTAT TTTTTTAGTA GTTGCAGTTG GTATTAGAAA TCCTCAGATT 
GCTTCTTATA CTAATAATAT AAATGGACCA TTAAGTTATT TACTTGATTC GAGAGATACA 
AGATTAATAT ATGCTTTAAT AATTATTTTA TTATTTAGTA TAGCGTATAT GGTTACAGCA 
ACATTAGCTT TAGGTATATC AGCTTGGGTT AAAAATAGAT ATTTAGTTTT AATTACCCCA 
TTCTTTTATT ACATTTTTTG TGGAACTATA GTAGAAAGAT TGGGAATTAA TAGGATTTTT 
GATTTTCATT TAGCGAGAGT TATCTCTTTG AAAAGATCTA TGACCACCCT TCCCAATGTA 
GTAATTTATC CATTATTAAT ATTTATTGTA GGAGTAGCTT TATTTTATAT AGGAGTGGTT 
ATTAAAAATG AAAAGGATTT ATAA 

 

Protein sequence

MKYYFKNELK RALFGKNAII SFSITLGILI AAFMKEFGFE SIKYISQYPT FDAIDALLIV 
MSSNIVIVFP LLATIIFSDS YLQEKESGFT KFIYTRMPLK KYVSIKVIVN SISSALVAGA 
SSLFMLIFLV VAVGIRNPQI ASYTNNINGP LSYLLDSRDT RLIYALIIIL LFSIAYMVTA 
TLALGISAWV KNRYLVLITP FFYYIFCGTI VERLGINRIF DFHLARVISL KRSMTTLPNV 
VIYPLLIFIV GVALFYIGVV IKNEKDL