Gene CPR_0045 details

Gene Information

• Locus tag: CPR_0045
• ID: 4204499
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Clostridium perfringens SM101
• Kingdom: Bacteria
• Replicon accession: NC_008262
• Strand: +
• Start bp: 51980
• End bp: 52699
• Gene Length: 720 bp
• Protein Length: 239 aa
• Translation table: 11
• GC content: 24%
• IMG OID: 642564588
• Product: hypothetical protein
• Protein accession: YP_697388
• Protein GI: 110803179
• COG category: [S] Function unknown
• COG ID: [COG3689] Predicted membrane protein

Plasmid Coverage information

• Num covering plasmid clones: 30
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGAAAAT TTAATTTTAG TGAATTCATA TGGTTTCTTA TATTATTTTG CTTTGAATAT 
TTAATAGTAA AAATGTTTAT GAGTGAAAAG ATTTTTTTGA TTATATCAAG AGATATGAAG 
GCATATGTAA TTTTGGCCAT AATATTATTA TTTTTGATTT TAGTTATACA ATTTTTCAAT 
ATTTTTAAAA CCTCAACTAG AAGGAATTTT AAGGGTGGAT ATTTAATTTT TATTTTTGCT 
TTAGTTATTT TAAATATAGC TAATGGATTA AATATTAATC AGGTATCCTT AAATTTAAAA 
GGAGTTAAGT TATATCATGA TAGACATAAA GAGAGTGAAC ATAATCATAT GCACTCTAAT 
GAAAAATTAA ATAGTAATGA AGCTTTAGTA TTTACAGAGA AAAATTTTCA TAGTTCCTTA 
GAAGAATTAA TACTTCATAT AGAAGATTTT GTAGGAAAAG AAATTTCTAT AGAAGGGCTT 
TTATATGTTA GTGAATTATA TGAAAAAGAA GAATTTGCAA TTACCCAAAT AGATATGACT 
TGCTGCATAG CTGATTCAGT GTACTTAGGA GTATTATGCA AGGGTGATTT GCCAGATTTA 
AAAAATGGAA GTGAAATAAA AGTTAAGGGA TTAGTTGAAT CTAAAAAGAT TAAAAATAGT 
GCAGGAGAAG AAATTGAAAT TCCATTTATA AATGTATTTT ACACAGATAC ATTACAGTAA 

 

Protein sequence

MRKFNFSEFI WFLILFCFEY LIVKMFMSEK IFLIISRDMK AYVILAIILL FLILVIQFFN 
IFKTSTRRNF KGGYLIFIFA LVILNIANGL NINQVSLNLK GVKLYHDRHK ESEHNHMHSN 
EKLNSNEALV FTEKNFHSSL EELILHIEDF VGKEISIEGL LYVSELYEKE EFAITQIDMT 
CCIADSVYLG VLCKGDLPDL KNGSEIKVKG LVESKKIKNS AGEEIEIPFI NVFYTDTLQ