Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPR_0034 |
Symbol | |
ID | 4204529 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens SM101 |
Kingdom | Bacteria |
Replicon accession | NC_008262 |
Strand | + |
Start bp | 42280 |
End bp | 42849 |
Gene Length | 570 bp |
Protein Length | 189 aa |
Translation table | 11 |
GC content | 25% |
IMG OID | 642564577 |
Product | TetR family transcriptional regulator |
Protein accession | YP_697378 |
Protein GI | 110802708 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATAGAA CTAAGAAAGC TATTTTTGAA GCAGCTATAA ACGTTTTTGC TACTTCAGGT TATAATGGAT CAACTGTAGA TGAAATTGCA TCTAAAGCTA ATGTTGCTAA GGGAACACTT TATTATAATT TTAAAAGTAA AGAGGAAATT TTTAATTTTG TAATTAGTAA AGGCTTAGAA ATTTGGCATG AAAAATTAAC TGATATAGAA AATTTAGAAG ATGAGCCTAT AGAAAAATTA AAAAAACTTT TTAAAATGCA ATTTGAATTA TTATATGAAA ATAGAGCATT TTTTAAAATG GTAATGAGTC AGCTTTGGGG AAAAGAAACT AGGCAAGATG AACTAAGAAA TAAAATAACT GAGTATATTG AAGGAATAGA GAGAATATTA AAAGAAGCTA TTTCAAAAAA ACAAATAAGA GAGTGTGATA TTTCCTTACT AGCTCACAGT TTATTTGGAA GTCTTATATC AACATCACTA TATGAATTAA GTAGAGATAA AGAGTTTAAT GTTAATAAAG TTATAGATGA GATTACAATT AACATCTTAG ATGGTATAGT TATAAAATAA
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Protein sequence | MNRTKKAIFE AAINVFATSG YNGSTVDEIA SKANVAKGTL YYNFKSKEEI FNFVISKGLE IWHEKLTDIE NLEDEPIEKL KKLFKMQFEL LYENRAFFKM VMSQLWGKET RQDELRNKIT EYIEGIERIL KEAISKKQIR ECDISLLAHS LFGSLISTSL YELSRDKEFN VNKVIDEITI NILDGIVIK
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