Gene CPF_3020 details

Gene Information

• Locus tag: CPF_3020
• Symbol: rrlH
• ID: 4202951
• Type: rRNA
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Clostridium perfringens ATCC 13124
• Kingdom: Bacteria
• Replicon accession: NC_008261
• Strand: -
• Start bp: 3029408
• End bp: 3032314
• Gene Length: 2907 bp
• GC content: 51%
• IMG OID: 640716651
• Product: 23S ribosomal RNA

Plasmid Coverage information

• Num covering plasmid clones: 26
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

AGGTCAAGCT ACAAAGGGCG CATGGTGAAT GCCTTGGCAT CAGGAGCCGA TGAAGGACGT 
GATAAGCTGC GATAAGCTTC GGGTAGGCGC ACATAGCCTG AGATCCGAAG ATCTCCGAAT 
GAGGAAACTC ACATGGGAAA CCCCATGTAT CATTAAGTGA ATACATAACT TAATGAAGGT 
AACCCAGGGA ACTGAAACAT CTAAGTACCT GGAGGAAGAG AAAGAAAAAT CGATTTTCTT 
AGTAGCGGCG AGCGAAAGGG AAAGAGCCCA AACCGGAAAC TTGTTTCCGG GGTTGAGGAC 
ATAACATAAA GAGAAGTAAT GGCTAATTGA AGAGAACTGG AAAGTTCCAC CGTAGAAGGT 
AATAGTCCTG TAAATGAAAG CTAGTATAAT CGAGTTATGA TCCAGAGTAC CACGAGACAC 
GTGAAACCTT GTGGGAAGCA GGGAGGACCA CCTCCCAAGG CTAAATACTA CCTGATGACC 
GATAGTGAAG CAGTACCGTG AGGGAAAGGT GAAAAGAACC CCAGGAGGGG AGTGAAATAG 
AACCTGAAAC CGTGTGCCTA CAACCGCTCA GAGCCCCTTA TGAGGGTGAT GAGGTGCTTT 
TTGTAGAACG AGCCAACGAG TTACGGTATG TAGCAAGGTT AAGTACTTAA GGTACGGAGC 
CGAAGGGAAA CCGAGTCTGA ATAGGGCGAC TAGTTGCATG CCGTAGACCC GAAACCGGGT 
GACCTATCCA TGGCCAGGTT GAAGCGAGGG TAAAACCTCG TGGAGGACCG AACCACGTTG 
CTGTTGAAAA AGCATGGGAT GAGCTGTGGA TAGCGGAGAA ATTCCAATCG AACCCGGAGA 
TAGCTGGTTC TCTCCGAAAT AGCTTTAGGG CTAGCGTCGA GTATGAGTAG TGGAGGTAGA 
GCACTGAATG GGCTAGGGGG CATAGCGCTT ACCGAACCTT ATCAAACTCC GAATGCCACA 
TACTTTGAGC TCGGCAGTCA GACTACGAAT GATAAGATCC GTGGTCAAAA GGGAAACAGC 
CCAGATCGTC AGCTAAGGTC CCAAAGTGTA AGTTAAGTGG GAAAGGATGT GAGATTTCTA 
AGACAACTAG GATGTTGGCT TAGAAGCAGC CATTCATTAA AAGAGTGCGT AATAGCTCAC 
TAGTCGAGAG ATCTTGCGCC GAAAATGTAA CGGGGCTAAA CTTACCACCG AAGCTACGGG 
CTTGAACTTA GTTCAAGCGG TAGGAGAGCG TCGTAACCGG GCTGAAGTCG TACCGTAAGG 
AGCGGTGGAC TGGTTACGAG TGAGAATGTT GGCATCAGTA GCGAGATGTG GGTGAGAATC 
CCACAGGCCG AAAACCTAAG GTTTCCTCAG GAAGGTTCGT CCGCTGAGGG TTAGTCGGGA 
CCTAAGCCGA GGCCGAAAGG CGTAGGTGAT GGACAACTGG TTGATATTCC AGTACCACTA 
CCATCGTTAT TATCGATGGC GTGACGCAGG AGGATAGTGT GTGCTAGCTA TTGGATGCTA 
GTCTAAGCGT TTAGGCAGTG AGAGTAGGCA AATCCGCTCT CATAATGCTG AGGCGTGATG 
GGGAAGGTTC CACGGAACCG AAGTACATGA TTCCACGCTG CCAAGAAAAG CGTCTAGAGA 
GAGAAGTAGT GCCCGTACCG CAAACCGACA CAGGTAGGTG AGGAGAGAAT CCTAAGGCCG 
GCGGAAGAAT TACAGTTAAG GAACTCGGCA AATTGACCCC GTAAGTTCGC GAGAAGGGGT 
GCCTACGAGA GTAGGCCGCA GAGAATAGGC CCAAGCAACT GTTTAGCAAA AACACAGGTC 
TCTGCTAAAG CGTAAGCTGA TGTATAGGGG CTGACGCCTG CCCGGTGCTG GAAGGTTAAG 
GGGAACACTT AGCGCAAGCG AAGGTGTGAA CTTAAGCCCC AGTAAACGGC GGCCGTAACT 
ATAACGGTCC TAAGGTAGCG AAATTCCTTG TCAGGTAAGT TCTGACCCGC ACGAATGGCG 
TAATGACTTG GGCACTGTCT CAACTGTAAA TCCGGCGAAG TTGTAGTGCG AGTGAAGATG 
CTCGCTACCC GCGATTGGAC GGAAAGACCC CGTAGAGCTT TACTGTAGCT TAGCATTGAG 
TTTTGGTATT GTCTGTACAG GATAGGTGGG AGACTAGGAA ACCAGGGCGT CAGCCTTGGT 
GGAGTCAACC TTGGGATACC ACCCTGACAG TACTGAAATT CTAACTGGCG GCCATGAATC 
TGGTCACAGG ACATTGTTAG GTGGGCAGTT TGACTGGGGC GGTCGCCTCC TAAAAAGTAA 
CGGAGGCGCC CAAAGGTTCC CTCAGAACGG TCGGAAATCG TTCGAAGAGT GCAAAGGCAG 
AAGGGAGCCT GACTGCGACA CCCACAAGTG GAGCAGGGAC GAAAGTCGGG CTTAGTGATC 
CGGTGGTACC TCGTGGGAGG GCCATCGCTC AACGGATAAA AGCTACCTCG GGGATAACAG 
GCTGATCTCC CCCAAGAGTC CACATCGACG GGGAGGTTTG GCACCTCGAT GTCGGCTCGT 
CGCATCCTGG GGCTGAAGTA GGTCCCAAGG GTTGGGCTGT TCGCCCATTA AAGCGGCACG 
CGAGCTGGGT TCAGAACGTC GTGAGACAGT TCGGTCCCTA TCCGTCGCGG GCGTAGGAAA 
TTTGAGAGGA GCTGTCCTTA GTACGAGAGG ACCGGGATGG ACTGACCTCT GGTGTACCAG 
TTGTTCCGCC AGGAGCACAG CTGGGTAGCT AAGTCGGGAA TGGATAAACG CTGAAAGCAT 
CTAAGCGTGA AGCCAACCTC AAGATGAGAT TTCCCATAGC GTAAGCTAGT AAGATCCCTT 
GAAGAACACA AGGTTGATAG GTCGGGGGTG TAAGCATGGT AACATGTTCA GCTGACCGAT 
ACTAATAGAT CGAGGGCTTG ACCAAAT 

 

Protein sequence