| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_2973 |
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| Symbol | |
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| ID | 4203503 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens ATCC 13124 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008261 |
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| Strand | - |
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| Start bp | 3236950 |
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| End bp | 3238908 |
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| Gene Length | 1959 bp |
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| Protein Length | 652 aa |
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| Translation table | 11 |
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| GC content | 28% |
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| IMG OID | 638083840 |
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| Product | DHH family protein |
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| Protein accession | YP_697327 |
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| Protein GI | 110799568 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3887] Predicted signaling protein consisting of a modified GGDEF domain and a DHH domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAATCAA TATTGGAAGA TTATAATAAA TTTTTAGCTT ACTTTGCATT TGTAGTTTTA
GCATGCTTAG TATTTTGGAA ATTAAACTTT AAAATAGTAT CTTTAGTAAT AGCTTTTATA
TATATAATAT ATTTAATCTA TAAAATATCT GACTTTTTAA GAGAAGAAAA GGATGAGGAA
GAAAAGATAG ATAAATTATA TAAAAATGTA GATGAGAAAG TTAAAGACAA TATTTTTAAT
TTGATTTTCC CATTAACTAT ATTAAATTCT ACTGGTGAAA TAATATGGTA TAACCATAAG
TTTAGTAAGC TTATAAATAG TGAAGATTTA CTAGAAACGA ATTTAGTATC TGTTATAAAA
GGTGTTGCTT TAGATAAGAT CATTAGAACA GGAAAAGAAA ATTCTCAAAA TATAAAAATA
AAAAGTAATA TCTATGAAGT TTATAGTGAG GGTTTAAAAT TAGATGAATC AGATAAAAAA
TATTTTTTAG TATTTTTTAA TGATGTTACT TATTTAAAGA AGGCCACAAA AGAAAGTATA
ATGCTTTTAG AAGTTGATAA TTTTAGTGAA GTTTTAAAAA CAATAGATGA TGACAAAAAA
CCATTACTTA TAGCAGAAAT AGAAAGAACA ATAAATAACT ATGGAAATTC ACTAAATGCC
ATGATAAAAA AATATGATAA TAGTAAATAT ATTTTATCAG TAGACGATGC TATTATTGGC
AAGGAAATTT CTAAAAAGTT TGATATACTA GATACTATAA GAGAAATTAA CTTAGGAAAT
GAAATAGAAG TAACCTTAAG CATAGGTGTT GGAAGAGGTG GAGAAACTCC TGCACAAAAC
CAAGATGATG CCACAAAGGC TAAGGAATTA GCTTTAGGTA GAGGTGGAGA TCAAGCAGTT
ATTAAATCAG GTAAAAATAT TGAGTTCTTT GGAGGAAATG CTAAGGAACT TGAAAAAAGA
ACAAGAGTTA GAGCTAGGGT TGTAGCCCAT GTATTAAAAG AACTTGTCTA TGAAAGTAGT
ACCGTTTATA TAATGGGACA TAAAAATCCT GATATGGATT GTTTTGGTGC TTCATTTGGT
TTAGCTTCAG TAGTGAAGAA GTTAGGAAAA AATGTTAATA TAGTATTAGA AAAAGATACT
AATGCTATAG AATTTTTCTT AGATAGAGTT AAAGAAAAAG AAGAATATAG TAAACTATTT
ATATCTACTG AAGAAGCTAA AAAGAATATA GATGACAATA CTTTATTAAT AATAGTAGAT
GTTAATAGTG CAAATTATGT ATTAGATAGA GAGTTAACAG AACTTATTGA AAGGGTGGTT
GTAATAGACC ATCACAGAAG AAGTCCTGAG GATATAAAAG GAGCACTATT AAATTATATT
GAGGTATATG CTTCATCTAC ATCAGAACTT GTTACTGAAA TGGTTCAGTA TATGTTAGAT
AAGCCTAAAT TAAATAGAAT TGAAGCAGAA GGTCTTTTAG CTGGAATTTA TATAGACACC
AAGAATTTCT CTTTTAAAAC CGGTGTAAGA ACCTTTGAAG CAGCTTCATT TTTAAGAAGA
TTAGGTGCAG ACACAGTAGA AATCAAAAAA ATATTTAGTA ATAACTTAGA AAATTATATA
GCAAAAGCAG AAATAATAAA ATCTGCAAAG GTAGAAAATA AAATAGCAAT AGCAGTTTGC
CCAGAAAATA TTACTGATAC TGTTGTGGCA GCTCAGGCTG CTGATGAACT TTTAAATATT
ACTGGAATAC AAGCTTCATT TGTATTAATA AAATTAGGTG AAGATGTTGC TATAAGTGCA
AGATCTTTAG GGGATATTAA TGTTCAAGTG ATTCTTGAAG AACTTGGTGG CGGAGGTCAT
ATGACTATGG CTGGCGCTAA GATTAAGGAT ACCACTATTG ACGAGGCTAT AGAAAAAATA
AAAGAAGCTA TTGCAAAAAA CTCAAGGGAA GGTGAATAA
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| Protein sequence | MKSILEDYNK FLAYFAFVVL ACLVFWKLNF KIVSLVIAFI YIIYLIYKIS DFLREEKDEE
EKIDKLYKNV DEKVKDNIFN LIFPLTILNS TGEIIWYNHK FSKLINSEDL LETNLVSVIK
GVALDKIIRT GKENSQNIKI KSNIYEVYSE GLKLDESDKK YFLVFFNDVT YLKKATKESI
MLLEVDNFSE VLKTIDDDKK PLLIAEIERT INNYGNSLNA MIKKYDNSKY ILSVDDAIIG
KEISKKFDIL DTIREINLGN EIEVTLSIGV GRGGETPAQN QDDATKAKEL ALGRGGDQAV
IKSGKNIEFF GGNAKELEKR TRVRARVVAH VLKELVYESS TVYIMGHKNP DMDCFGASFG
LASVVKKLGK NVNIVLEKDT NAIEFFLDRV KEKEEYSKLF ISTEEAKKNI DDNTLLIIVD
VNSANYVLDR ELTELIERVV VIDHHRRSPE DIKGALLNYI EVYASSTSEL VTEMVQYMLD
KPKLNRIEAE GLLAGIYIDT KNFSFKTGVR TFEAASFLRR LGADTVEIKK IFSNNLENYI
AKAEIIKSAK VENKIAIAVC PENITDTVVA AQAADELLNI TGIQASFVLI KLGEDVAISA
RSLGDINVQV ILEELGGGGH MTMAGAKIKD TTIDEAIEKI KEAIAKNSRE GE
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