Gene CPF_2972 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_2972 
SymbolrplI 
ID4201766 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand
Start bp3236502 
End bp3236948 
Gene Length447 bp 
Protein Length148 aa 
Translation table11 
GC content28% 
IMG OID638083839 
Product50S ribosomal protein L9 
Protein accessionYP_697326 
Protein GI110800780 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0359] Ribosomal protein L9 
TIGRFAM ID[TIGR00158] ribosomal protein L9 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGTAA TATTACTTCA AGACGTTAAA AAATTAGGTA AAAAAGGCGA TGTTATAAAT 
GCATCAGATG GATATGCTAG AAACTTTTTA TTTCCAAAGA AATTAGCTCA AGAAGCTACT
GATAATAATC TTCATATATT AAATAATAAA AAAGAGAACG AAAGAAGACA AAAGTTAGCT
GAATTAGAAG CTGCTCAAGC TTTAGCTGCT GATTTAAAAG ATAAAGTAAT AAAAATAGAT
GGTAAGGCTG GAGATAATGG AAAATTATTC GGAGCTATAA CTAGCAAAGA TGTAGCAGGA
CTTATCAAAA AACAATTTAA TGTAGAAGTT GATAAAAAGA AAATTGTTAT GGATACAATA
AAAATTGCAG GAACTTATAA CATAGAAGTT AAACTATATC CAGAAGTTTC AACAAAAATG
AAGGTTATGG TTGTTCCTGT TCAATAA
 
Protein sequence
MKVILLQDVK KLGKKGDVIN ASDGYARNFL FPKKLAQEAT DNNLHILNNK KENERRQKLA 
ELEAAQALAA DLKDKVIKID GKAGDNGKLF GAITSKDVAG LIKKQFNVEV DKKKIVMDTI
KIAGTYNIEV KLYPEVSTKM KVMVVPVQ