Gene CPF_2968 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_2968 
Symbol 
ID4201106 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand
Start bp3231094 
End bp3231582 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content33% 
IMG OID638083835 
ProductPTS system, IIB component 
Protein accessionYP_697322 
Protein GI110798983 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3444] Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCAATAG TACATTTCAG AGTTGACGGA AGACTTATTC ATGGACAAGT AGCCTTGGCT 
TGGTCTAAAA TGACAAATCC AAATCATATT ATAGTTGCCA ATGATATGGT TGCTAGTGAT
CCAAATCAAC AAGCAATACT AAAATTAGCT GCTCCAAAGC AAGTAAGAAT ATCAATGCAG
CCAGTTGATA AGGTTATTGC ATACTTAAAT AGAGGACTAG CTCCAAATGA GAGAGTTTTT
CTATTAGTTA AGGATGTGGT AGATGCTAAT AGGATTTATG AGGGTGGATT TAAATATATG
GACCTTAATA TAGGCAATAT GACTCATAAA CCAAATGCTA AAAAATTAAG TGAAAAACTA
TTTGTTACAG AAAAAGAGTT TGAAGCATTA AAAAGTTTGC TAGATAAAAA TGTTAATTGC
TACTTCCAAA TGATTCCGAC AGACTCAAAG CAAGATATTA GACCGTTAGT AGAGGCTTTT
AAAAGTTAA
 
Protein sequence
MPIVHFRVDG RLIHGQVALA WSKMTNPNHI IVANDMVASD PNQQAILKLA APKQVRISMQ 
PVDKVIAYLN RGLAPNERVF LLVKDVVDAN RIYEGGFKYM DLNIGNMTHK PNAKKLSEKL
FVTEKEFEAL KSLLDKNVNC YFQMIPTDSK QDIRPLVEAF KS