| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_2967 |
|---|
| Symbol | |
|---|
| ID | 4201979 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium perfringens ATCC 13124 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008261 |
|---|
| Strand | - |
|---|
| Start bp | 3230256 |
|---|
| End bp | 3231047 |
|---|
| Gene Length | 792 bp |
|---|
| Protein Length | 263 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 638083834 |
|---|
| Product | PTS system, IIC component |
|---|
| Protein accession | YP_697321 |
|---|
| Protein GI | 110800370 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG3715] Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAAGAAA TAGGAATTAT ACAAATTTTA CTACTCTCTG TATGGGCTTT CCTAAGCATT
AATGAGATGC TAGGTCCTTA TCTAGGTTTA TGGCATAGGC CGTTAATAGC TGGTTTTGGA
GCAGGTCTTA TCTTAGGAGA TATTCAAACT GGTCTTTTTG TAGGGGCTAC TTTAGAAATG
ATGTCTCTTG GAGTTCACTC ATATGGTGGA GCTGTTGTTC CAGACTATAC TACTGGTGCT
ATTTTAGGAG TTACTTTTGG TTATTTAACT GGAAGTTATG AAAGTGGTAT TGCACTAGGA
GTTCCAATAG CTTTATTAGG ATCATACTTA GATGTATTAG CGAGATTATC TACTGGAATT
TGTGCTCATA AAGCTGATTC ACATGCTGCA AATGGAAACT TAAAAGGAAT GTGGAGATGG
CATTTATTTG GATCAATTCC ATGGGGATTA TCAAGAGCAA TTCCTGTTTT CGTAGGTGCA
TTCTTTGGTT CAGAGGTTGC TACTGCATTT ATAGAAAAGG TTCCTGTATG GTTAACTAAT
GGATTCGCTG CTGCAGGACG TGCAATGCCA GCATTAGGGG TTGCAATATT ATTAAACTAC
CTACCAATAA CTAAACAATG GTATTTTGCT ATTATGGGAT TCATATTAGT ATGTTTCTTA
AATTTACCAA TGATCGCAGT TGGTTTAATA GGTCTTATAA CTGCTGTTAT TTACGTTGAG
TTATATCATA AAAATGATGG AGCTAAAGTA AATAATGAGG AAGATTTTGA GCAGATAGGA
GGCGAATTCT AA
|
|---|
| Protein sequence | MQEIGIIQIL LLSVWAFLSI NEMLGPYLGL WHRPLIAGFG AGLILGDIQT GLFVGATLEM
MSLGVHSYGG AVVPDYTTGA ILGVTFGYLT GSYESGIALG VPIALLGSYL DVLARLSTGI
CAHKADSHAA NGNLKGMWRW HLFGSIPWGL SRAIPVFVGA FFGSEVATAF IEKVPVWLTN
GFAAAGRAMP ALGVAILLNY LPITKQWYFA IMGFILVCFL NLPMIAVGLI GLITAVIYVE
LYHKNDGAKV NNEEDFEQIG GEF
|
|---|
| |