Gene CPF_2965 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_2965 
Symbol 
ID4201094 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand- 
Start bp3228873 
End bp3229277 
Gene Length405 bp 
Protein Length134 aa 
Translation table11 
GC content33% 
IMG OID638083832 
ProductPTS system, IIA component 
Protein accessionYP_697319 
Protein GI110800824 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2893] Phosphotransferase system, mannose/fructose-specific component IIA 
TIGRFAM ID[TIGR00824] PTS system, mannose/fructose/sorbose family, IIA component 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATAGGTG TACTAGTAGC AACTCACGGT GAAATGGCAA AAGGGTTATT TGATGCAATA 
GATATGATTT GTGGAACCCA AGAGAAATTT AGCATAGTAT CTTTAAAAAG AGGACAAGAT 
GCAGAAAGTT TTGGTGAAGA GCTTGGAGAA AAAATAAATG AATTAAATAG TGGTGAGGGA 
GTGGTGGTTC TTGTAGATTT ATTAGGAGCA ACTCCAATGA ATCAATCAGC CTTAAATTTA 
TATAAATCAG ATAAGGTAGA GGTAATAACA GGGGTAAACT TGCCTATGGT TGTTACTGCA 
ACAATGGAGA GAGATTGTTT TAGTGATATA AAAGAATTAG TTGAAAAGAT AAAAAATGAT 
GGCAAAGATA GTGTTTGTAG TGTGAGAGAA TTATTAAACA TATAA
 
Protein sequence
MIGVLVATHG EMAKGLFDAI DMICGTQEKF SIVSLKRGQD AESFGEELGE KINELNSGEG 
VVVLVDLLGA TPMNQSALNL YKSDKVEVIT GVNLPMVVTA TMERDCFSDI KELVEKIKND 
GKDSVCSVRE LLNI