| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_2940 |
|---|
| Symbol | |
|---|
| ID | 4203537 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium perfringens ATCC 13124 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008261 |
|---|
| Strand | + |
|---|
| Start bp | 3214397 |
|---|
| End bp | 3215392 |
|---|
| Gene Length | 996 bp |
|---|
| Protein Length | 331 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 25% |
|---|
| IMG OID | 638083807 |
|---|
| Product | DNA replication protein DnaC |
|---|
| Protein accession | YP_697304 |
|---|
| Protein GI | 110800140 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG1484] DNA replication protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.443717 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATTAAAG GTTATAAAAG TCAATTGATG GATATGTATG AAAAAATCCG TCAAAAAGAA
AAATCAAATC TAGCTAATAG ACAAAAAGAG TTAAAAGAAA AGCTACCTCA AGTTTTTGAG
TATGAAAGAG AAATAAATAA GCTTTCTTTA AAACTTTCAA TGCTTGCTTT AAGAAAACAT
GAAAAAGAAA GTTTTGAAAA ATTAAAAAAA GAAATTGAAA ATCTTAGAGA TGAAAAAGAT
CAACTACTTG CTATGAGTGG ATATCCAAAA GATTATTTAG ATATGCATTA TACCTGTCAA
TCTTGCAAAG ATACAGGATA TATAGGCACT AAAAAATGTA TTTGTTATAA GAAAAAACTT
GTAGACATAT ACTATGAAAA TTCTCATATG GCTGATGCTT TAAAGCTAAA TAATTTTTCA
AAATTTGATA TAAATGTTTT TTCTCCTTTA AATAATGGTA ATGAAAAATA TTCTCCAAGA
GAAAATATGC AAATAATCAT TGATAAAATG GTTAATGGAT ATATCCCTAA ATTTGATAAG
CATAATGAAA ATATACTTTT CTATGGTAGT CCTGGAACTG GAAAAACATT TTTAACTTAT
TGCATAGCTA AAGAATTATT AGATAATGGA TTTCTTGTAG TTTATAGAAC ATCAGATGAA
CTTATTAGAA ATCTTAGAGA AATACGATTT AATAATGATC ATGAATTAGA AGATTTGCTT
ATAAATTGTG ACTTACTTGT TATAGATGAC TTAGGCGCAG AACAAATAAC TGATTTCTCT
ACAACTGAGT TATTTACCCT TCTAAACAAA AAAATATTAT TAAATAAAAA GATGATTATA
TCTACAAATT TAAATCTTCC TGAATTGAAG CAAGCTTATG CAGAAAGAAT AACTTCTAGA
TTGCTAGGAA ACTTTCTTCT ATTTAAAACT TACGGAGATG ACATAAGAAT AAAGAAAAAT
CTTCAAAAAA GAAAAAATAC ACCTTATCTT ACTTAA
|
|---|
| Protein sequence | MIKGYKSQLM DMYEKIRQKE KSNLANRQKE LKEKLPQVFE YEREINKLSL KLSMLALRKH
EKESFEKLKK EIENLRDEKD QLLAMSGYPK DYLDMHYTCQ SCKDTGYIGT KKCICYKKKL
VDIYYENSHM ADALKLNNFS KFDINVFSPL NNGNEKYSPR ENMQIIIDKM VNGYIPKFDK
HNENILFYGS PGTGKTFLTY CIAKELLDNG FLVVYRTSDE LIRNLREIRF NNDHELEDLL
INCDLLVIDD LGAEQITDFS TTELFTLLNK KILLNKKMII STNLNLPELK QAYAERITSR
LLGNFLLFKT YGDDIRIKKN LQKRKNTPYL T
|
|---|
| |