Gene CPF_2938 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_2938 
Symbol 
ID4203423 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand
Start bp3212117 
End bp3213169 
Gene Length1053 bp 
Protein Length350 aa 
Translation table11 
GC content31% 
IMG OID638083805 
ProductM24/M37 family peptidase 
Protein accessionYP_697302 
Protein GI110798888 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0739] Membrane proteins related to metalloendopeptidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTATTT CAGAGGGTGA GGGGAGAAAC TTTATTAAAG TTTTTCTAAT TACCTTAATT 
ATTTTATTTT GTACAGTTAA AACTAATGTT TTTGCTAACT CTTTATATCA AAGATGGGGA
AGTGAAAAAC TTATTTTTGT AAATATGCCT TGTATGGCTA ATGTTTATGT GGAGGCTTAT
GAATTATCTC TAAATAACAA AGGTATAGGG TATATAGGAA ATCCTGATAC AGTTGAAACT
GTTTTAAATA AAATAAAACA AACATACATA GATAAGGCTT CTGAAAAGGG AGTTTTAGTT
AAAGAAGTAA ATTTTGATAC AAAAATAGAT TTAAAAAAGA AAATGATTCA ATCTAAAGAT
TTAAGTTCAG TAGAGGATAT AACTTCAAAG ATAATGCTTG CTAATGATAT TTTAGAAGAG
TCATTACTAG ATGTAACTAT TGAAGCTGAA ATTGATGAAG TGGCATCAAT AGAGCCAGCA
GTTGAAGTTA TAAAACTAGA AGACAAGTAT TTAGGAGAAA ATACTATTAA AGAAGGAAAA
TGGGGAGAGA AAAAGGTTAA AAAGAAAGTA ACATTTGTAA ATGGAAAAGA ATCAGAAAGT
GAAATAATAT CTGAATCAGT TTTGAAAGAA GCTGAGAGTA CAAAAATATA TAAGGGAATA
AAAAATCCAA TTAACTCTAA TATGGCATTT TTAACTCATC CAACTAGAGG AGGAGTTATA
ACATCTGTCT TTGGAGAAAA GAGTAGAGGA GGCCATAGAG GGGTTGATAT AGCGGTTCCT
AGTGGAACAC CAATAGGAGC TGCTTTTGAT GGTGTAGTAA GTTTTGTTGG ATATGACGAC
ATATATGGCA ATATGGTTAA GATAAAACAC GATGATAATA CAGAAACTCT CTACGCTCAT
GCTAGTTATA TATTAACTGA GCTTGGAAAA GAAGTGAAAA AAGGTGAGAC TATTGCCAAA
GTTGGTAGTA CTGGAAGAAG TACGGGGCCT CACCTGCATT TAGAACTTAT ATATAAGGGT
AATCCTATTA ATCCTGTAGA TTATATAAGT TAG
 
Protein sequence
MSISEGEGRN FIKVFLITLI ILFCTVKTNV FANSLYQRWG SEKLIFVNMP CMANVYVEAY 
ELSLNNKGIG YIGNPDTVET VLNKIKQTYI DKASEKGVLV KEVNFDTKID LKKKMIQSKD
LSSVEDITSK IMLANDILEE SLLDVTIEAE IDEVASIEPA VEVIKLEDKY LGENTIKEGK
WGEKKVKKKV TFVNGKESES EIISESVLKE AESTKIYKGI KNPINSNMAF LTHPTRGGVI
TSVFGEKSRG GHRGVDIAVP SGTPIGAAFD GVVSFVGYDD IYGNMVKIKH DDNTETLYAH
ASYILTELGK EVKKGETIAK VGSTGRSTGP HLHLELIYKG NPINPVDYIS