Gene CPF_2930 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_2930 
Symbol 
ID4203906 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand
Start bp3205524 
End bp3206024 
Gene Length501 bp 
Protein Length166 aa 
Translation table11 
GC content30% 
IMG OID638083797 
Producthypothetical protein 
Protein accessionYP_697294 
Protein GI110799890 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0653] Preprotein translocase subunit SecA (ATPase, RNA helicase) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTTTAT ATAAGCAATG GACAGACATG GTTGTAGAAT ATGTTAAGGT TAAGGGAGAA 
GCTGCATTCT GGAAAGAATA TAGTGATGTA GAAACTAAAA TATACAAAGA TTTATTAGCT
AATCACAAAG AAGTTAAGAA AGCTACAATT GCAGATTTAG CTAAAGAATA CGGTACAACA
GAAGAGTTTG TAATGGGATT CGTAGATGGA ATAAACGATA GTTTAAAAAC TCCATATGAC
TTAGAAAAAG TTGAAAGCAA TACAGAATTA TCATTTGATA TAGACTTTGA AAATTTATAC
TATAATATGT TAGATGCAAA AGCAGATTAC TTATTTAACT TACCTCAATG GGATGCTATA
TTCTCAGGAG AAAAGAGAAG AGAAATCCAA TTCAGATACA GAGATTCAAA AACTGTAAGA
AATGAAGAAG TTAAAGTTGG AAGAAATGAA CCATGTCCAT GTGGAAGTGG AAAGAAATAT
AAAAAGTGTT GTGGAAAATA A
 
Protein sequence
MSLYKQWTDM VVEYVKVKGE AAFWKEYSDV ETKIYKDLLA NHKEVKKATI ADLAKEYGTT 
EEFVMGFVDG INDSLKTPYD LEKVESNTEL SFDIDFENLY YNMLDAKADY LFNLPQWDAI
FSGEKRREIQ FRYRDSKTVR NEEVKVGRNE PCPCGSGKKY KKCCGK