Gene CPF_2927 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_2927 
Symbol 
ID4201779 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand
Start bp3203450 
End bp3203929 
Gene Length480 bp 
Protein Length159 aa 
Translation table11 
GC content27% 
IMG OID638083794 
ProductrRNA large subunit methyltransferase 
Protein accessionYP_697291 
Protein GI110798803 
COG category[S] Function unknown 
COG ID[COG1576] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00246] rRNA large subunit m3Psi methyltransferase RlmH 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATATAA CAGTTATTTC AGTAGGGAAA CTAAAGGAAA AGTATTTAAA GCAAGCTATA 
GATGAGTATT CAAAAAGATT AAGTAGATAT TGCAAATTAG AAATAATAGA ACTTCCTGAT
GAGAAAACAC CAGATAATGC TTCAGAAAAA GAGGAGCTTC AAATAAAAGA AAAAGAAGGT
AAGTTAATAC TTTCAAAAAT AAAGGATAAT ATGCATGTAA TTGCTATGGA TTTAAAAGGT
AATGAAATAA CTTCTGAGAA ATTTTCAAAG TATATAGAGA ATTGTGGAGT TATGGGAAAT
TCAAATATTA CCTTTGTAAT TGGAGGAAGC CTTGGTTTAT CACAAGAAGT AATAAAAAGA
GCTGATTACA AATTATGCTT TTCAAAAATG ACATTTCCCC ATCAATTATT TAGAGTAATG
TTATTAGAAC AAGTTTATAG AGCATTTAGA ATTATGAAGA ATGAACCTTA TCACAAATAA
 
Protein sequence
MNITVISVGK LKEKYLKQAI DEYSKRLSRY CKLEIIELPD EKTPDNASEK EELQIKEKEG 
KLILSKIKDN MHVIAMDLKG NEITSEKFSK YIENCGVMGN SNITFVIGGS LGLSQEVIKR
ADYKLCFSKM TFPHQLFRVM LLEQVYRAFR IMKNEPYHK