Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPF_2915 |
Symbol | |
ID | 4201897 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens ATCC 13124 |
Kingdom | Bacteria |
Replicon accession | NC_008261 |
Strand | - |
Start bp | 3188606 |
End bp | 3190762 |
Gene Length | 2157 bp |
Protein Length | 718 aa |
Translation table | 11 |
GC content | 29% |
IMG OID | 638083782 |
Product | putative phage infection protein |
Protein accession | YP_697279 |
Protein GI | 110801296 |
COG category | [S] Function unknown |
COG ID | [COG1511] Predicted membrane protein |
TIGRFAM ID | [TIGR03061] YhgE/Pip N-terminal domain [TIGR03062] YhgE/Pip C-terminal domain |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGAAAA TTTTTAAAGT CTTTCGAAGA GATTTAAGAA ATATAAGGAA AAATCCAGCG GCTTTAGCAA TAGTCATTGG TTTATGTATA ATACCATCTC TTTATGCTTG GATTAACATT AAGGCATGTT GGGACCCTTA TGTTAATACA GGAAATTTAC CAGTTGCCGT TGTCAATAAT GACAAGGGCG CTGAGGTAAA TGGTAAAGAG ATAAATGTAG GTAAGGAAGT AATTGATGAA CTTAAAAAGA ATGATGCTAT AGGATGGCAA TTTGTAGATG CATGGCAAGG AAATTATGGA TTAAATGAAG GTAAGTATTA TGCAATGATT GAAATACCTT CAGATTTCTC AGAGGGATTA ACAAGTTTAA TTACAGGAAG TCCTCAAAAG CCGGATATAA TTTATAAAGT AAATGAAAAA TCTAATGCTA TAGCAAACAA AATAACAAAT GTTGCAAAGA ATAAAGTTAC AGATGAAATA AAATCTAACT TTGTTGATAC TGTAAATAAA GAAGCTTTTG ATATTTTAAA TCAATTAGGT GGAAAGTTAG AAACTAATAA ACCGGAAATA TTAAAAGTGA GAGATACATT ACAAAGTGCT AATAGTAGTT TAAAGGAAAT TCAAGATTTT GTTCAAAAAG CTAATGGAGA TTCAAAAAGT TTAAGTAGTT ATCTTTCTAG TGTAAGAAAT GATTTACCAA AGGTAACAGA TCAAATAAAT AATTTACAAA CTACTGTTGA GGCAAGTAAA AGTTTAATAA ATTCAACACA ACAAACAGTT AACGCTGTAT CAAATAGCTT TAGCAGTGAT GTTGTAACAA TGCAATCAAC AAACCAGGAA TTACAAAGTT TACTTTCAAA GCTTAAAGAA TTAAATAATG CTATGGATAC AACTAAGATG GTTGAAACTG TAGATAAGTT AATAAAATTA ACAGATTCAT TAAATAAAAT TATAGATAAT AATCTTAAAG CTTTAGAAAA AATAAATTCC GTAATACCAA ATAATAAAAT AGGTAATTTA ATAAATAAGT TAAATACTGC AAAAAATTTA GTATCTAAAG AAAGAGAACA ATTAGTTGCT TTAAAAACAG CATTATCAAA CAATGAAAGT AAGGAAAATA TAGCTAATGC TATAGAGTCT GTTTCTACAA TAAGTACTGA AACAAGCTCA GCTTTAATAA ATGTTTCAAA TACTTTTTAT AATGATGGAG CACCAGCTTT AAATACTATT GGAAATTCAT TAAAAGGTGG ATTAGATACA GCAAACTCAG TATTAGAAAC AACAAAGGTA GTTGTTCCAC AGCTAAATGC TTTAACTACT TTTGGTATAG CTAGTAGTGA TGTAGCTAGT CAACAAGCTG ATCAAGTAAC AAGTAAGCTT AGTGAGTTCC AAGACGCAAT TAGTCAATTA ATAGAAAAAA CTTCAGGATT AACTGAGGAG AATTTAAATA ACCTAATAGA TTTAATGAGT AAGAATCCAG AAGAAATAGC ATCATTTATA TCCTCTCCTA TAACAGTAAA AGAGGAACAG GTTTATGATG CAGGAATATT TGGAGTAGGA CTTACACCAT TTTATACAAC TTTAGCAATT TGGGTTGGTT CATTATTACT TACATCATTA TTAACAGCAG AGTGTGAGGA TTTTGAAGAT GGAACAAAAT TAAATCTTAT CCAAAAGCAT TTTGGTAAAA TGTTATTATT CTTGACTATA TCATTAATTC AAACAGTAAT AGTAGTTTTA GGGGATATAT ATATATTAGG AGTAAATCCT GCAAATATGC CATTGATGTT TGGATTCGCA ATAGTTAGTT CTATTGTATT TACGGTAATG ATATTTACCT TAGTATCATT ATTTGGAAAC ATAGGTAAAG CAATAGCCAT TGTTATAATG GTATTCCAAG TAGCAGGTGC TGGAGGAATT TATCCAATAC AGACAAATCC AAAAATATTT GAGGTTCTAC AACCTTTATG GCCATTTACT TATTCTATAG ATGGATTTAG AGAAGCTATA GCTGGGCCAA TATGGGATTC TGTATCTAAG GATATGAAAG CCTTAGGAAT ATTCTTATTA ATATTCTTAT TACTATGTAT TCTTAAAAAG CCATTCCATA GACTTACTGA GTTTGTAGAG CATAAATTTA GAGAATCAGG ATTATAA
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Protein sequence | MKKIFKVFRR DLRNIRKNPA ALAIVIGLCI IPSLYAWINI KACWDPYVNT GNLPVAVVNN DKGAEVNGKE INVGKEVIDE LKKNDAIGWQ FVDAWQGNYG LNEGKYYAMI EIPSDFSEGL TSLITGSPQK PDIIYKVNEK SNAIANKITN VAKNKVTDEI KSNFVDTVNK EAFDILNQLG GKLETNKPEI LKVRDTLQSA NSSLKEIQDF VQKANGDSKS LSSYLSSVRN DLPKVTDQIN NLQTTVEASK SLINSTQQTV NAVSNSFSSD VVTMQSTNQE LQSLLSKLKE LNNAMDTTKM VETVDKLIKL TDSLNKIIDN NLKALEKINS VIPNNKIGNL INKLNTAKNL VSKEREQLVA LKTALSNNES KENIANAIES VSTISTETSS ALINVSNTFY NDGAPALNTI GNSLKGGLDT ANSVLETTKV VVPQLNALTT FGIASSDVAS QQADQVTSKL SEFQDAISQL IEKTSGLTEE NLNNLIDLMS KNPEEIASFI SSPITVKEEQ VYDAGIFGVG LTPFYTTLAI WVGSLLLTSL LTAECEDFED GTKLNLIQKH FGKMLLFLTI SLIQTVIVVL GDIYILGVNP ANMPLMFGFA IVSSIVFTVM IFTLVSLFGN IGKAIAIVIM VFQVAGAGGI YPIQTNPKIF EVLQPLWPFT YSIDGFREAI AGPIWDSVSK DMKALGIFLL IFLLLCILKK PFHRLTEFVE HKFRESGL
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