Gene CPF_2915 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_2915 
Symbol 
ID4201897 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand
Start bp3188606 
End bp3190762 
Gene Length2157 bp 
Protein Length718 aa 
Translation table11 
GC content29% 
IMG OID638083782 
Productputative phage infection protein 
Protein accessionYP_697279 
Protein GI110801296 
COG category[S] Function unknown 
COG ID[COG1511] Predicted membrane protein 
TIGRFAM ID[TIGR03061] YhgE/Pip N-terminal domain
[TIGR03062] YhgE/Pip C-terminal domain 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGAAAA TTTTTAAAGT CTTTCGAAGA GATTTAAGAA ATATAAGGAA AAATCCAGCG 
GCTTTAGCAA TAGTCATTGG TTTATGTATA ATACCATCTC TTTATGCTTG GATTAACATT
AAGGCATGTT GGGACCCTTA TGTTAATACA GGAAATTTAC CAGTTGCCGT TGTCAATAAT
GACAAGGGCG CTGAGGTAAA TGGTAAAGAG ATAAATGTAG GTAAGGAAGT AATTGATGAA
CTTAAAAAGA ATGATGCTAT AGGATGGCAA TTTGTAGATG CATGGCAAGG AAATTATGGA
TTAAATGAAG GTAAGTATTA TGCAATGATT GAAATACCTT CAGATTTCTC AGAGGGATTA
ACAAGTTTAA TTACAGGAAG TCCTCAAAAG CCGGATATAA TTTATAAAGT AAATGAAAAA
TCTAATGCTA TAGCAAACAA AATAACAAAT GTTGCAAAGA ATAAAGTTAC AGATGAAATA
AAATCTAACT TTGTTGATAC TGTAAATAAA GAAGCTTTTG ATATTTTAAA TCAATTAGGT
GGAAAGTTAG AAACTAATAA ACCGGAAATA TTAAAAGTGA GAGATACATT ACAAAGTGCT
AATAGTAGTT TAAAGGAAAT TCAAGATTTT GTTCAAAAAG CTAATGGAGA TTCAAAAAGT
TTAAGTAGTT ATCTTTCTAG TGTAAGAAAT GATTTACCAA AGGTAACAGA TCAAATAAAT
AATTTACAAA CTACTGTTGA GGCAAGTAAA AGTTTAATAA ATTCAACACA ACAAACAGTT
AACGCTGTAT CAAATAGCTT TAGCAGTGAT GTTGTAACAA TGCAATCAAC AAACCAGGAA
TTACAAAGTT TACTTTCAAA GCTTAAAGAA TTAAATAATG CTATGGATAC AACTAAGATG
GTTGAAACTG TAGATAAGTT AATAAAATTA ACAGATTCAT TAAATAAAAT TATAGATAAT
AATCTTAAAG CTTTAGAAAA AATAAATTCC GTAATACCAA ATAATAAAAT AGGTAATTTA
ATAAATAAGT TAAATACTGC AAAAAATTTA GTATCTAAAG AAAGAGAACA ATTAGTTGCT
TTAAAAACAG CATTATCAAA CAATGAAAGT AAGGAAAATA TAGCTAATGC TATAGAGTCT
GTTTCTACAA TAAGTACTGA AACAAGCTCA GCTTTAATAA ATGTTTCAAA TACTTTTTAT
AATGATGGAG CACCAGCTTT AAATACTATT GGAAATTCAT TAAAAGGTGG ATTAGATACA
GCAAACTCAG TATTAGAAAC AACAAAGGTA GTTGTTCCAC AGCTAAATGC TTTAACTACT
TTTGGTATAG CTAGTAGTGA TGTAGCTAGT CAACAAGCTG ATCAAGTAAC AAGTAAGCTT
AGTGAGTTCC AAGACGCAAT TAGTCAATTA ATAGAAAAAA CTTCAGGATT AACTGAGGAG
AATTTAAATA ACCTAATAGA TTTAATGAGT AAGAATCCAG AAGAAATAGC ATCATTTATA
TCCTCTCCTA TAACAGTAAA AGAGGAACAG GTTTATGATG CAGGAATATT TGGAGTAGGA
CTTACACCAT TTTATACAAC TTTAGCAATT TGGGTTGGTT CATTATTACT TACATCATTA
TTAACAGCAG AGTGTGAGGA TTTTGAAGAT GGAACAAAAT TAAATCTTAT CCAAAAGCAT
TTTGGTAAAA TGTTATTATT CTTGACTATA TCATTAATTC AAACAGTAAT AGTAGTTTTA
GGGGATATAT ATATATTAGG AGTAAATCCT GCAAATATGC CATTGATGTT TGGATTCGCA
ATAGTTAGTT CTATTGTATT TACGGTAATG ATATTTACCT TAGTATCATT ATTTGGAAAC
ATAGGTAAAG CAATAGCCAT TGTTATAATG GTATTCCAAG TAGCAGGTGC TGGAGGAATT
TATCCAATAC AGACAAATCC AAAAATATTT GAGGTTCTAC AACCTTTATG GCCATTTACT
TATTCTATAG ATGGATTTAG AGAAGCTATA GCTGGGCCAA TATGGGATTC TGTATCTAAG
GATATGAAAG CCTTAGGAAT ATTCTTATTA ATATTCTTAT TACTATGTAT TCTTAAAAAG
CCATTCCATA GACTTACTGA GTTTGTAGAG CATAAATTTA GAGAATCAGG ATTATAA
 
Protein sequence
MKKIFKVFRR DLRNIRKNPA ALAIVIGLCI IPSLYAWINI KACWDPYVNT GNLPVAVVNN 
DKGAEVNGKE INVGKEVIDE LKKNDAIGWQ FVDAWQGNYG LNEGKYYAMI EIPSDFSEGL
TSLITGSPQK PDIIYKVNEK SNAIANKITN VAKNKVTDEI KSNFVDTVNK EAFDILNQLG
GKLETNKPEI LKVRDTLQSA NSSLKEIQDF VQKANGDSKS LSSYLSSVRN DLPKVTDQIN
NLQTTVEASK SLINSTQQTV NAVSNSFSSD VVTMQSTNQE LQSLLSKLKE LNNAMDTTKM
VETVDKLIKL TDSLNKIIDN NLKALEKINS VIPNNKIGNL INKLNTAKNL VSKEREQLVA
LKTALSNNES KENIANAIES VSTISTETSS ALINVSNTFY NDGAPALNTI GNSLKGGLDT
ANSVLETTKV VVPQLNALTT FGIASSDVAS QQADQVTSKL SEFQDAISQL IEKTSGLTEE
NLNNLIDLMS KNPEEIASFI SSPITVKEEQ VYDAGIFGVG LTPFYTTLAI WVGSLLLTSL
LTAECEDFED GTKLNLIQKH FGKMLLFLTI SLIQTVIVVL GDIYILGVNP ANMPLMFGFA
IVSSIVFTVM IFTLVSLFGN IGKAIAIVIM VFQVAGAGGI YPIQTNPKIF EVLQPLWPFT
YSIDGFREAI AGPIWDSVSK DMKALGIFLL IFLLLCILKK PFHRLTEFVE HKFRESGL