| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_2907 |
|---|
| Symbol | |
|---|
| ID | 4203282 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium perfringens ATCC 13124 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008261 |
|---|
| Strand | + |
|---|
| Start bp | 3179937 |
|---|
| End bp | 3181229 |
|---|
| Gene Length | 1293 bp |
|---|
| Protein Length | 430 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 30% |
|---|
| IMG OID | 638083774 |
|---|
| Product | xanthine/uracil permease family protein |
|---|
| Protein accession | YP_697271 |
|---|
| Protein GI | 110801107 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2252] Permeases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATAACT TTTTTAAACT TAAAGAACAT GAAACAAATA TAAGAACAGA ATTACTTGCT
GGTCTTACCT CATTTTTTGC TGCAGTTTAT ATAATTGTAG TAAATGCTAG CATACTTAGT
GATGGTGGAG TATCTATGGA ACCACTTATA ATAGCTACAG TATTAGCATC ATTAATTGGA
TGTGTACTAG TTGCACTTTT AAGTAATGCT CCTCTTATTA TAATGCCTGG TATGGGTATT
AATGCACTAT TTACTTATAC CATAGTAAAT ACTATGGGAC TTACATTCCA ACAAGCTTTA
GCAGCTGTTA TAGTAGCTGG TATTTTGTTT ATTGTGGTAG CGGTTACACC TTTAGCAGAT
ATGTTAACTA GTTCAATACC AACCTCATTA AAAGAAGCAA TAACAGTTGG AATTGGTATT
TTTATTACTT TCTTAGGATT ACAAAAGGCT GGCTTAATAG TAGGAGATGC CTCAACACTT
GTTAAATTAG GTGATATTTC ATCTAAAGAA GTTATAGTAT TCTTCATAAC TATGATACTA
ATGCTAGTTT TATTTATAAA AGATGTACCA GGTTCATTCT TAATAGGAAT TTTATCTGGA
ACAATTATAT CAATGTTATT TGGAATTGTT GATTTATCAA ATTTTCAATT CTCATTACCT
AATTTCAGTG AATATAAACA AGTTTTCTTA TCAGCTAATT TTAGTGGAAT AACTTCAATT
TCATTTTGGA TTGCAACCTT CTCACTAACT TTAGTCCTAG TATTTGAAAA CATTGGTTTA
CTTCATGGAC AAATTGATGG TATGTTAAAA CAACCAAGTA AAAGACAAAG AGCTCTTAAC
GCTGTTGCCT TTACTACTAT AATTTGTGGT ATCTGTGGTA CTAGTCCTTC AGTTTCAACT
GTAGAAGGTA GTGCAGGAAT AGCAGCAGGT GGTAAAACAG GATTAACTTC TATATTTACA
GGATTTTTAT TTTTAATATC AATCTTCTTT ATACCAGTTA TATCACTTAT TCCAAACTCA
GCAATAGCTC CAGTCTTAAT AATAATTGGA GGCTTAATGA TTCAAAATAT AGTTTCAATA
AACTTTGAAG ACTTCACTGA ATCATTCCCA GCATTCCTTA CTTTAACTAT AATACCTTTA
ACATTTAGTA TAGTTGATGG TATTGCTTTT GGATTTATAG CTTATCCTAT TTGTAAGTTA
GCAACAAAGA AGTATAAAGA TGTATCTATC CCTATGTACG TTATATCAGC AATCTTTTTA
GTATATTTTG TACTTCACGC TACACAAATA TAG
|
|---|
| Protein sequence | MNNFFKLKEH ETNIRTELLA GLTSFFAAVY IIVVNASILS DGGVSMEPLI IATVLASLIG
CVLVALLSNA PLIIMPGMGI NALFTYTIVN TMGLTFQQAL AAVIVAGILF IVVAVTPLAD
MLTSSIPTSL KEAITVGIGI FITFLGLQKA GLIVGDASTL VKLGDISSKE VIVFFITMIL
MLVLFIKDVP GSFLIGILSG TIISMLFGIV DLSNFQFSLP NFSEYKQVFL SANFSGITSI
SFWIATFSLT LVLVFENIGL LHGQIDGMLK QPSKRQRALN AVAFTTIICG ICGTSPSVST
VEGSAGIAAG GKTGLTSIFT GFLFLISIFF IPVISLIPNS AIAPVLIIIG GLMIQNIVSI
NFEDFTESFP AFLTLTIIPL TFSIVDGIAF GFIAYPICKL ATKKYKDVSI PMYVISAIFL
VYFVLHATQI
|
|---|
| |