Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPF_2889 |
Symbol | |
ID | 4200995 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens ATCC 13124 |
Kingdom | Bacteria |
Replicon accession | NC_008261 |
Strand | - |
Start bp | 3159984 |
End bp | 3160655 |
Gene Length | 672 bp |
Protein Length | 223 aa |
Translation table | 11 |
GC content | 29% |
IMG OID | 638083756 |
Product | DNA-binding protein |
Protein accession | YP_697253 |
Protein GI | 110798931 |
COG category | [K] Transcription |
COG ID | [COG1813] Predicted transcription factor, homolog of eukaryotic MBF1 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTAGAG TTGGGGAAAG AATAAAAGAG GCTAGACAAA AAAGTGGAAT GACACAAAAA GCTTTAGCTA AAAAGCTAGG TGTAGCTGAG AAGTTTGTAA ATGAAGTTGA AACAGGAAGA AAAATTATAA ATGAATCACT TATATCAAAG GTATCAAAGG TTTTAAATAC TGATTTAAAT GATATAAATA TGGTTGTTAC TGATGAGGAA CTTCAAAAAG AACTTAAAGC TGAAAAGCAA GTAAGACAAA CAAAACCAGC AGAGGTTAAT GAAGTTTGGA ATCAAGCCTT TGGATCAGTT TTAAAAAATG TTCCAATATA TGATTATTCA TTAGCTCAGG TTAAGGGATA TAAACAACTT GCCACTGCTT CAAATAAAAT AGATGGTCAT ACAGCAAACA AAGTTTTTTA TTTAAAAATA GAAAATAATG ATATGACTGG CTATAGAATT CAAGAGAATG ATTTAGCTTT ATGCTATTCA ATAAAAGAGA TAGAAAATAA TTCTATTTGT TTAGTTGAAT TCAATGGAAA AAGAGTTATT AGACAAATTA AAAAGCTAGA TAACGTTAAG GCTTTACTAA TAAGCAATAA TGGTAGCATG AGAACAGAGA CAGCTAACAT AAAAGAAATT AAGGCAATTG CTAAGCTTTA TAGAATAGAA TTTGATTTAT AA
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Protein sequence | MSRVGERIKE ARQKSGMTQK ALAKKLGVAE KFVNEVETGR KIINESLISK VSKVLNTDLN DINMVVTDEE LQKELKAEKQ VRQTKPAEVN EVWNQAFGSV LKNVPIYDYS LAQVKGYKQL ATASNKIDGH TANKVFYLKI ENNDMTGYRI QENDLALCYS IKEIENNSIC LVEFNGKRVI RQIKKLDNVK ALLISNNGSM RTETANIKEI KAIAKLYRIE FDL
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