| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_2887 |
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| Symbol | cspB |
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| ID | 4201610 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens ATCC 13124 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008261 |
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| Strand | - |
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| Start bp | 3156394 |
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| End bp | 3158091 |
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| Gene Length | 1698 bp |
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| Protein Length | 565 aa |
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| Translation table | 11 |
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| GC content | 31% |
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| IMG OID | 638083754 |
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| Product | protease CspB |
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| Protein accession | YP_697251 |
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| Protein GI | 110800758 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1404] Subtilisin-like serine proteases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAAATA AAGCTAAGGT TGGCATAGAT TTTATAAATA CAATACCCAA GCAAATACTA
ACTAGCTTAA TAGAACAATA TTCCCCTAAT AATGGAGAGA TAGAGTTAGT TGTTTTATAT
GGAGATAATT TTTTAAGATT TAAAAATTCA GTAGATGTCA TAGGTGCTAA AGTTGAAGAT
TTAGGATATG GATTTGGAAT ACTTATAATA AAGGTTAATG ACTTAAATAG GATAATTGAG
CTTGAAGGCC TTCAATATAT AGAGCTACCC AAAATTTTAT ATACATCAGC TTATGATAGT
AATAGAGCAT CATGCATTCC ATCAGTTTGG AATAATTATA ATTTAACTGG AGAAGGAATA
TTAGTTGGTT TTTTAGATAC TGGAATAGAC TACACTCATA ATGCTTTTAA AGATGCTGAG
GGCAATACCA GGATAGAGTA TATATATGAT CTTGAAAATG GAGTTGTATA TGATAAAAAT
AAAATAAATG AAGCTTTAAA ATCTGAAGAT CCATTTAGCA TTGTACCTGA AATTGATTTA
TCAGGTCATG GAACTCATGT TGCAGGAATT GCATGTGCCG GAGGAAATAT AAACTTTGAT
AATTATGGAG TTGCATATAA AAGTAGCATA GCAATGGTAA AGATAACTGG TGAGAATAGT
TTAAGGGCGG CCTTAAGTAC ACAGCTTATG AGAGGTTTAA AATTTTTAAT GGATAAAAGT
AATGAAATTA ATAAACCTTT AGTTGTAAAT ATAAGTTTAA GTACAAATGA TGGTTCTCAT
AATGGAAGTA GTTTACTAGA AAAGTATATT CAAACTTTTA CGCAATTACA AAAGGCAGTT
ATTGTAGTAG CTGCTGGGAA TGAAGGTAAT AGTGCTCATC ATGTAGGGGG CAAGATGAAA
AAAGAAGAAG ATTTAGACTT AAATATAGGA GATGGAGAAA AAGGTATTAT ATTAGATTTT
TTCAAGCCTG TATTAGTTGA TGTATCAGTT GAAGTAATTT CACCAACTGG AATAAGTACA
GGACCAATAG AATTATCTGA GTCTTATAAA GAAAGATTTG TTGGAAGAGA AAAAATAGTT
GTATATAGTA CTGGTCCTAA GCCTTTTGAT ATACAAGGAC AAACTACCAT AAGTATTTTG
CCCTTAGGAG ATACAATAAC TTCTGGTGGA TGGAGAATTA TAGTTAGAAA ATTAAATAAT
TATGAGGGAT ATTTTGATAT TTGGTTACCT ATAGCAGAAG GATTAAATGA AAGAACAAGA
TTTTTACAAC CATCTGTTTA TAATACCTTA GGAATCCCTG CAACTGTAGA AGGGGTTATC
TCCGTTGGAA GTTATAATTT TTTAAACAAT AATTTATCAG CTTTTTCTGG AAGAGGAGTT
GTTAGACCTG AGTGGTTAAT AAAACCAGAT TTAGTTGCTC CAGGTGAAAA CATATTATCC
ACTGTTGAGG AGCAAGGATT TGATACTAAA AGTGGTACAT CAATGGCTGC GCCACAAGTT
TCTGGAATAT GTGCTCTTCT TTTTGAATGG GGGATTATAA GAAATAATGA TCCTTTTTTA
TATGGAGAAA GAATTAAATA TTATTTGATT AAAGGAGCAA AGAGGACGAT CTTTGGTGAG
GCATATCCAA ATCCAGACTT GGGATATGGA TTTGTATGTT TAGATAGAAC AATGGAATTA
TTAATTAATA GGAGATAG
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| Protein sequence | MENKAKVGID FINTIPKQIL TSLIEQYSPN NGEIELVVLY GDNFLRFKNS VDVIGAKVED
LGYGFGILII KVNDLNRIIE LEGLQYIELP KILYTSAYDS NRASCIPSVW NNYNLTGEGI
LVGFLDTGID YTHNAFKDAE GNTRIEYIYD LENGVVYDKN KINEALKSED PFSIVPEIDL
SGHGTHVAGI ACAGGNINFD NYGVAYKSSI AMVKITGENS LRAALSTQLM RGLKFLMDKS
NEINKPLVVN ISLSTNDGSH NGSSLLEKYI QTFTQLQKAV IVVAAGNEGN SAHHVGGKMK
KEEDLDLNIG DGEKGIILDF FKPVLVDVSV EVISPTGIST GPIELSESYK ERFVGREKIV
VYSTGPKPFD IQGQTTISIL PLGDTITSGG WRIIVRKLNN YEGYFDIWLP IAEGLNERTR
FLQPSVYNTL GIPATVEGVI SVGSYNFLNN NLSAFSGRGV VRPEWLIKPD LVAPGENILS
TVEEQGFDTK SGTSMAAPQV SGICALLFEW GIIRNNDPFL YGERIKYYLI KGAKRTIFGE
AYPNPDLGYG FVCLDRTMEL LINRR
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