| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_2881 |
|---|
| Symbol | comB |
|---|
| ID | 4203455 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium perfringens ATCC 13124 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008261 |
|---|
| Strand | - |
|---|
| Start bp | 3149057 |
|---|
| End bp | 3149800 |
|---|
| Gene Length | 744 bp |
|---|
| Protein Length | 247 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 29% |
|---|
| IMG OID | 638083748 |
|---|
| Product | 2-phosphosulfolactate phosphatase |
|---|
| Protein accession | YP_697245 |
|---|
| Protein GI | 110801374 |
|---|
| COG category | [H] Coenzyme transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG2045] Phosphosulfolactate phosphohydrolase and related enzymes |
|---|
| TIGRFAM ID | [TIGR00298] 2-phosphosulfolactate phosphatase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAATTG ATGTTATAAT TTCTGCAGAT TACATAGATA GTGAAGCACT TAAAGGAAAG
ATAGCTGTGG TTATAGATAT GTTAAGAGCT ACATCTGTAA TTACTACAGC ACTTTATAAT
GGAGCTAAAA AGGTTATACC AGTAGTTAGT GTTGAAGAGG CTTTTGAAAA AGCAAAAGAA
TTAAAATCTT TAGGTGAAGA AGTTTTACTT GGAGGAGAGA GAAAGGCTTT AAAAATAGAT
GGATTTGATT TCTCTAATTC TCCATTAGAA TACAAAAGAG AAATAGTAGA AGGAAAAAAT
GTAATAATGT CTACTACAAA TGGAACTAGA GCTTTAAATT TATGCAGCAA AGCAGATAAA
GTTATAGTTG CCTCTGTGTT AAATGGACAA GCGGTAGCTA AATATTTAGA AAATGAAGAA
AAAGAAATAG TCTTTGTTAA TTCTGGAACA AACGGTGAAT TTTCAAGTGA TGATTTTATG
TGTGCAGGTT ATATAATAAG TGAATTATGT AAAAACAAAG AGGCTGAACT TACTGATATA
GCTAAAACAG CTAAATATGT TTATGAAAGC AGTGAAGGAA TAGAAGAGTT TATAAAAGAT
GCTAAACACT ATAATATTCT TAAAAATTTA GGACTAGAAG AGGATTTAAA GTATTGTTCT
ACAAAGAATT TAATAGATTT AGTTTTTGAA TTTAAAAATG GTGAAATAAA AACTGTGGAA
TCAGGAGTTA AAGTGACAAT ATAA
|
|---|
| Protein sequence | MKIDVIISAD YIDSEALKGK IAVVIDMLRA TSVITTALYN GAKKVIPVVS VEEAFEKAKE
LKSLGEEVLL GGERKALKID GFDFSNSPLE YKREIVEGKN VIMSTTNGTR ALNLCSKADK
VIVASVLNGQ AVAKYLENEE KEIVFVNSGT NGEFSSDDFM CAGYIISELC KNKEAELTDI
AKTAKYVYES SEGIEEFIKD AKHYNILKNL GLEEDLKYCS TKNLIDLVFE FKNGEIKTVE
SGVKVTI
|
|---|
| |