Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPF_2861 |
Symbol | |
ID | 4201817 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens ATCC 13124 |
Kingdom | Bacteria |
Replicon accession | NC_008261 |
Strand | - |
Start bp | 3128394 |
End bp | 3129086 |
Gene Length | 693 bp |
Protein Length | 230 aa |
Translation table | 11 |
GC content | 29% |
IMG OID | 638083728 |
Product | membrane protein |
Protein accession | YP_697225 |
Protein GI | 110800385 |
COG category | [C] Energy production and conversion [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG4232] Thiol:disulfide interchange protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.563665 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGAATTTT TAGCTTATTT TAATAGTGTC ATATCTAATA ATATATTTTT AGCCATAATA CTATCATTTT TTGCAGGAGT AGTAGCCTCT TTTAGTCCAT GTACCCTTTC ATCTATTCCA TTATTAATAG GATATGTTCA AGGTAGTGAG GTTAAGGATA ATAAGAAAGC ATTTAAGTAT TCACTGATAT TTTCAATTGG ACTTGGAATA ACATTTACTG TAATAGGTTT ACTTACAGCC TTAATAGGAA AAGCCTTTTT AGGTGCAGGA AAGTTTTGGT ATATAATATT GGCTTTTATT ATGATAGGAT CAGGGCTACA AGTTCTTGAT GTAATAAATT TATTTGGAGA TAAAAAAGAG GCTTGTAAAA TCACTAAAAG AAGAGAGGGA ATTTTAGATG CCTTCTTTTT AGGAATATTA AGTGGAATAT TAGCATCTCC TTGTGCAACA CCTATAATGG CAGCAATAAT AGCCTTTATA GCTGCTAGTG GTAACTTAGT AATAGGAATG ATAATGCTTT TAATGTATTC ATTAGGTCAT AGTGTTTTAA TAATTTTAGC TGGAACATCC TTTGGATTAG TTGAGAAAAT AGCCTACTCT GAAAATGGTA AAAAGATAGG AAGAGTATTA AAAAATATAT TAGGAACAAT TATAATATTA GTTGGATTAT ACTTATTTTA TCTTGGAGTA TAG
|
Protein sequence | MEFLAYFNSV ISNNIFLAII LSFFAGVVAS FSPCTLSSIP LLIGYVQGSE VKDNKKAFKY SLIFSIGLGI TFTVIGLLTA LIGKAFLGAG KFWYIILAFI MIGSGLQVLD VINLFGDKKE ACKITKRREG ILDAFFLGIL SGILASPCAT PIMAAIIAFI AASGNLVIGM IMLLMYSLGH SVLIILAGTS FGLVEKIAYS ENGKKIGRVL KNILGTIIIL VGLYLFYLGV
|
| |