Gene CPF_2842 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_2842 
Symbol 
ID4203581 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand
Start bp3105967 
End bp3106989 
Gene Length1023 bp 
Protein Length340 aa 
Translation table11 
GC content32% 
IMG OID638083709 
Product3D/G5 domain-containing protein 
Protein accessionYP_697206 
Protein GI110800607 
COG category[S] Function unknown 
COG ID[COG3583] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAA TAATTAAGGC ATTGAAAGAG AAGGTTGCCT CGAAAAATGG AAAAATTGTA 
TTAGGAGTAT TTAGTTTAGT TTTAGTAAGT TTTATAGCAG TTTTAGTTAC AGCACATAAG
AATATAACCA TAAACTTAGA TGGTGAAAAT TTAGAGGTTG CCACATTTAA AGGAAATGTA
CAAGCAGTTT TGAGTCAACA AGGAATTTAC TTATCTGACA AGGATAAAAT AGAACCAAGT
TTAACAAGCG AGATTGCTGA TAATGATGTA ATAAGCATTA AGAAGGCAGT TCCAGTAGAA
GTAATGGTTG ATGGAAAAAA TATAGAGATA GATTCTGCGG AAGATTCAGT AAAGAATATG
CTGGTTAAAG AAGGAATTAA TCTAAATGAT TTAGACAAAG TAGAGCCTTC ATTAGAAACA
GAACTATCAA AGGATTTGAA AATAAAGATT ACAAGAGTTG AAGAGAAGAC CATAGTTGAA
AAAGAGCCAA TAGACTTTGA AACTGTAGTA AAGGAAGATG ATAACTTAGA GAGTGGAGTT
AAAAAGACTA CTCAAGAGGG TTCTGCTGGA GAAAAGGAAA TAACTATGAA GTTAGTTATG
GAAGATGGAA AAGAAGTATC TAGAGAAGTA GTAGAATCTA AAGTTGTTAA AGAACCAGTA
GATGAAGTAG TGGTTAAAGG AACTATGGAG AAATTAGTTC TTTCAAGAGG AAACGATAAT
ATAAATTATA AAAAAGCAAT GGTAGTAGAA GCTACTGCCT ATTCTGGAGA TGGAATAACA
GCTACAGGAA CTGTACCTAA GAGAGATCCA AATGGATTAA GTACAATAGC TGTTGACCCT
AGAGTAATAC CTTTAGGAAC TAAGGTTTAT GTAGAAGGAT ATGGCTATGC AGTAGCAGAA
GACACTGGTG GAGCTATAAA AAATAATATA ATAGATTTAT TCTTAAATTC AGCACCTGAA
TGTAAACAGT GGGGAAGAAG AAATGTTAAT CTTTATATAA TAGCTTATCC TGGTGAATGG
TAA
 
Protein sequence
MKKIIKALKE KVASKNGKIV LGVFSLVLVS FIAVLVTAHK NITINLDGEN LEVATFKGNV 
QAVLSQQGIY LSDKDKIEPS LTSEIADNDV ISIKKAVPVE VMVDGKNIEI DSAEDSVKNM
LVKEGINLND LDKVEPSLET ELSKDLKIKI TRVEEKTIVE KEPIDFETVV KEDDNLESGV
KKTTQEGSAG EKEITMKLVM EDGKEVSREV VESKVVKEPV DEVVVKGTME KLVLSRGNDN
INYKKAMVVE ATAYSGDGIT ATGTVPKRDP NGLSTIAVDP RVIPLGTKVY VEGYGYAVAE
DTGGAIKNNI IDLFLNSAPE CKQWGRRNVN LYIIAYPGEW