| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_2833 |
|---|
| Symbol | |
|---|
| ID | 4201777 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium perfringens ATCC 13124 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008261 |
|---|
| Strand | + |
|---|
| Start bp | 3098565 |
|---|
| End bp | 3099005 |
|---|
| Gene Length | 441 bp |
|---|
| Protein Length | 146 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 30% |
|---|
| IMG OID | 638083700 |
|---|
| Product | PadR family transcriptional regulator |
|---|
| Protein accession | YP_697197 |
|---|
| Protein GI | 110798801 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1695] Predicted transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTATAATG ATGAATTTAT AAAAGCTGAA GAAAAACGCC TTTATGATGA ATACAAAAAA
CAGGTAGCCA ATTTAAAAAA AGTACAAAAA GAAAAAGATG CTGTAGGACA AGTCTTCACT
AAGGGCCTTC TTCCTATATA CGCATTATAT ATTCTTAGTA TTCAACCTAC TAACGGAAAC
GATTTAGCTC AGAAAATTGG TGAACAAACT AATGGGCTTT GGTTTCCTAG CACAGGTGGA
ATATATCCCT TACTAAAGAA ATTAGAAAAA CAAGGCTTTG TAACTGGCTC TTGGGATGAT
CCTAAAAGAA AAATACAAAA AGTATATTCT TTAACGCCAG AAGGTTTTAA AGAGTTTGAA
GAAAAAAAAC ATTTATTAAA GCCTAAAATA AAAGAAGCCT TAGAAGTCTT TAAAATAATA
TATTCACATC TTTATAACTA A
|
|---|
| Protein sequence | MYNDEFIKAE EKRLYDEYKK QVANLKKVQK EKDAVGQVFT KGLLPIYALY ILSIQPTNGN
DLAQKIGEQT NGLWFPSTGG IYPLLKKLEK QGFVTGSWDD PKRKIQKVYS LTPEGFKEFE
EKKHLLKPKI KEALEVFKII YSHLYN
|
|---|
| |