| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_2822 |
|---|
| Symbol | |
|---|
| ID | 4201689 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium perfringens ATCC 13124 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008261 |
|---|
| Strand | - |
|---|
| Start bp | 3083918 |
|---|
| End bp | 3085132 |
|---|
| Gene Length | 1215 bp |
|---|
| Protein Length | 404 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 29% |
|---|
| IMG OID | 638083689 |
|---|
| Product | heme/steroid binding domain-containing protein |
|---|
| Protein accession | YP_697186 |
|---|
| Protein GI | 110798636 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4892] Predicted heme/steroid binding protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTACAATT TTTTTGAAGA AAAGTTTGAG CAAATAAATA AATTGAAACA TTTAATGACT
TTATCTAAAG GAAATAATCA AGCTAAAACA TATAAAGAAC AAATAGAAGA TATTTTTAAA
GAATTTCAAA GGGACTATAT AAGAGAAGAG AGTAATACTA TGCTTATTCT GACAAAGGAG
GAATTAGCAA ATTTTAATGG GGAAAATGGA AATCCAGCCT ATATTTCTAT AGATGGTATT
ATATATGATA TTTCAAATAT AGAATTGTTT AAACAAAGTC CTTATAACAG TTTAAAACTT
GGAAGTGATG TAACAGAGGC CTTTGATGAA TTAAATGATG GAGATGAATC TATATTAAGA
GATATTCCTA TGGTAGGGCT TTTAGCAGAA CCTGAGGAAG CTGAAATTAT GAATGGAGTG
GAAGAGTATT ACCCACAACA AAGACTAAAA ATAATGAGTT CAGAAGAACT TAAAAAATAT
AATGGAGAGA ATGGAAGTTT AGCATATGTA GCTATTGAAG GAATAGTTTA TGATATAACC
AATTTATCAG TTTTGGAGCT ATTTAATGGG ACAAAATTAA GATTAGGCTC TGATATTACT
GAAGAATTTA AAACTTATTA CAGAGGGGAT AAGGAGCTTT TAAAGGATGC TAAAGAAGTA
GCAATATTAC ATGATTTCAA TGAAAGTCAA AGGGGAAAAC ATATTGAACG CAATCTTAAG
GAGTTAACTT TAAAGGAATT ATCAAAATAT GATGGAAAAA ATGGGAACCC TGCTTATATA
GCAGTTAATG GCATAATATA CGATGTTACA AATGAAGCTG TTTTTAAAAA AAGTCCACAT
AATTCAGTGA ATTTAGGAGT TGATATTAAT AAAGAATTTA ATGGATGTCA TAATGCAGAT
GAAGGCGTAT TATCTAAGCT TCCTATAGTT GGAACTGTTA TGTTAAAAAA AGAGCCTTTA
GTGAAGGATA CGGGTTCTAA GGAATTTAAT ATAAATGAAC TTAGTAATTA TAATGGAAAG
AATGGAAAGC CACCTTATAT AGCAGTATTT GGGACAGTAT ATGATTTAAC TGATGTAGAT
AAATGGCAAG AAAAAAACAT AAAAGTAGGA TGTGATTTAA CTGGAGAATA TAAAGAGGTT
TATGGGAATG ATAAATCTCA TTTAAAAAAT TTAAAAGTTG CAGGGGTCTT AACTTGTAGT
TTAAATGATT ATTAA
|
|---|
| Protein sequence | MYNFFEEKFE QINKLKHLMT LSKGNNQAKT YKEQIEDIFK EFQRDYIREE SNTMLILTKE
ELANFNGENG NPAYISIDGI IYDISNIELF KQSPYNSLKL GSDVTEAFDE LNDGDESILR
DIPMVGLLAE PEEAEIMNGV EEYYPQQRLK IMSSEELKKY NGENGSLAYV AIEGIVYDIT
NLSVLELFNG TKLRLGSDIT EEFKTYYRGD KELLKDAKEV AILHDFNESQ RGKHIERNLK
ELTLKELSKY DGKNGNPAYI AVNGIIYDVT NEAVFKKSPH NSVNLGVDIN KEFNGCHNAD
EGVLSKLPIV GTVMLKKEPL VKDTGSKEFN INELSNYNGK NGKPPYIAVF GTVYDLTDVD
KWQEKNIKVG CDLTGEYKEV YGNDKSHLKN LKVAGVLTCS LNDY
|
|---|
| |