Gene CPF_2817 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_2817 
Symbol 
ID4202986 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand
Start bp3078504 
End bp3079523 
Gene Length1020 bp 
Protein Length339 aa 
Translation table11 
GC content28% 
IMG OID638083684 
ProductLacI family transcription regulator 
Protein accessionYP_697181 
Protein GI110799864 
COG category[K] Transcription 
COG ID[COG1609] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones48 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTGTAA CAATAAATAA TATCGCAAAA GAAGCGGGAG TTTCTTTAGC TACAGTTTCT 
AGGGTTATAA ATAATTCTGG ATATGTTAAA GATGAAACTC GTGAAAAGGT TATGAAAGTT
ATAAATAAAT ATAACTATAC TCCTAGTGCT ATTGCTAGAA GTCTTTCAAA AAGTATTACT
AATACTATTG GAGTTATAGT TCCTGATATT ACAAATCCAT TCTTTGGATC AATAATAAAA
GGAATAAGTG ATGTTGCAGA AGTGCATAAT CTTAATTTGA TTCTTTGTGA CTCTAACGAG
AGTATCGATA GGGAAATAAA GGCTATTAAA ACATTAAAAG AACAAAGAAT TAGGGGAATT
ATAATTTGTC CAACCTCTGT TGAAAATGAT TTAAATAGCG AGTACTTAAA AGCTATTACA
AATTTAGGCA TACCAGTCAT ATTAGTTGAT GGAAGTCTTA AATATCATAA TTTTAACGGC
GTTTTTGTGG ACAACATTAA AGGTTCTTAT GATGCTATCG AAGCTTTAAT TAAAGCTAAT
CATAGGGATA TAGCAATAAT TACTGGTCGC ATGACATCTA AACCAGCTCA GGACAGATTA
TTAGGATATG AAAAAGCATT ATTAATGAAT AATATTCCTA TAAATAATGA CTTAATTTTT
TATGGAAATT ATGAAGAAGA AAGTGGATAT GAATGTACTA AGAAAATCTT AGCTATGAAA
AATAGACCTT CAGCCATTTT TGTATGTAAT AATCTTATGA CTTTAGGTTG CTTAAAAGCT
TTAAGAGAAG CAAACCTTGA GTTATCAAAA GATATTTCAT TAATTTCCTT TGATAATATA
CCTATATTAG ATACACTAGG TATAAATCTT AGTCACATAA ATGGTCCAAC TAGAGAACTT
GGAGAGATTG GTATGAATTT ACTAATAGAA TCTTTAAATA ATGACTCTAA AAAAGAATTA
AATAGTATAA TAATAACTCC TGAACTTGTT TTGAAAGGTT CAGAAAAGTT AATAAAATAA
 
Protein sequence
MSVTINNIAK EAGVSLATVS RVINNSGYVK DETREKVMKV INKYNYTPSA IARSLSKSIT 
NTIGVIVPDI TNPFFGSIIK GISDVAEVHN LNLILCDSNE SIDREIKAIK TLKEQRIRGI
IICPTSVEND LNSEYLKAIT NLGIPVILVD GSLKYHNFNG VFVDNIKGSY DAIEALIKAN
HRDIAIITGR MTSKPAQDRL LGYEKALLMN NIPINNDLIF YGNYEEESGY ECTKKILAMK
NRPSAIFVCN NLMTLGCLKA LREANLELSK DISLISFDNI PILDTLGINL SHINGPTREL
GEIGMNLLIE SLNNDSKKEL NSIIITPELV LKGSEKLIK