Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPF_2817 |
Symbol | |
ID | 4202986 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens ATCC 13124 |
Kingdom | Bacteria |
Replicon accession | NC_008261 |
Strand | + |
Start bp | 3078504 |
End bp | 3079523 |
Gene Length | 1020 bp |
Protein Length | 339 aa |
Translation table | 11 |
GC content | 28% |
IMG OID | 638083684 |
Product | LacI family transcription regulator |
Protein accession | YP_697181 |
Protein GI | 110799864 |
COG category | [K] Transcription |
COG ID | [COG1609] Transcriptional regulators |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 48 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTCTGTAA CAATAAATAA TATCGCAAAA GAAGCGGGAG TTTCTTTAGC TACAGTTTCT AGGGTTATAA ATAATTCTGG ATATGTTAAA GATGAAACTC GTGAAAAGGT TATGAAAGTT ATAAATAAAT ATAACTATAC TCCTAGTGCT ATTGCTAGAA GTCTTTCAAA AAGTATTACT AATACTATTG GAGTTATAGT TCCTGATATT ACAAATCCAT TCTTTGGATC AATAATAAAA GGAATAAGTG ATGTTGCAGA AGTGCATAAT CTTAATTTGA TTCTTTGTGA CTCTAACGAG AGTATCGATA GGGAAATAAA GGCTATTAAA ACATTAAAAG AACAAAGAAT TAGGGGAATT ATAATTTGTC CAACCTCTGT TGAAAATGAT TTAAATAGCG AGTACTTAAA AGCTATTACA AATTTAGGCA TACCAGTCAT ATTAGTTGAT GGAAGTCTTA AATATCATAA TTTTAACGGC GTTTTTGTGG ACAACATTAA AGGTTCTTAT GATGCTATCG AAGCTTTAAT TAAAGCTAAT CATAGGGATA TAGCAATAAT TACTGGTCGC ATGACATCTA AACCAGCTCA GGACAGATTA TTAGGATATG AAAAAGCATT ATTAATGAAT AATATTCCTA TAAATAATGA CTTAATTTTT TATGGAAATT ATGAAGAAGA AAGTGGATAT GAATGTACTA AGAAAATCTT AGCTATGAAA AATAGACCTT CAGCCATTTT TGTATGTAAT AATCTTATGA CTTTAGGTTG CTTAAAAGCT TTAAGAGAAG CAAACCTTGA GTTATCAAAA GATATTTCAT TAATTTCCTT TGATAATATA CCTATATTAG ATACACTAGG TATAAATCTT AGTCACATAA ATGGTCCAAC TAGAGAACTT GGAGAGATTG GTATGAATTT ACTAATAGAA TCTTTAAATA ATGACTCTAA AAAAGAATTA AATAGTATAA TAATAACTCC TGAACTTGTT TTGAAAGGTT CAGAAAAGTT AATAAAATAA
|
Protein sequence | MSVTINNIAK EAGVSLATVS RVINNSGYVK DETREKVMKV INKYNYTPSA IARSLSKSIT NTIGVIVPDI TNPFFGSIIK GISDVAEVHN LNLILCDSNE SIDREIKAIK TLKEQRIRGI IICPTSVEND LNSEYLKAIT NLGIPVILVD GSLKYHNFNG VFVDNIKGSY DAIEALIKAN HRDIAIITGR MTSKPAQDRL LGYEKALLMN NIPINNDLIF YGNYEEESGY ECTKKILAMK NRPSAIFVCN NLMTLGCLKA LREANLELSK DISLISFDNI PILDTLGINL SHINGPTREL GEIGMNLLIE SLNNDSKKEL NSIIITPELV LKGSEKLIK
|
| |