Gene CPF_2808 details

Gene Information

• Locus tag: CPF_2808
• Symbol: pth
• ID: 4202173
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Clostridium perfringens ATCC 13124
• Kingdom: Bacteria
• Replicon accession: NC_008261
• Strand: -
• Start bp: 3068546
• End bp: 3069112
• Gene Length: 567 bp
• Protein Length: 188 aa
• Translation table: 11
• GC content: 28%
• IMG OID: 638083676
• Product: peptidyl-tRNA hydrolase
• Protein accession: YP_697173
• Protein GI: 110798942
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0193] Peptidyl-tRNA hydrolase
• TIGRFAM ID: [TIGR00447] peptidyl-tRNA hydrolase

Plasmid Coverage information

• Num covering plasmid clones: 37
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATTTTAA TAGTTGGATT AGGAAATCCG GGAAAACAAT ATGAGCAAAC TAGACATAAC 
ATTGGATTTG ATGTAATTGA TTATATGGCA AATAAGTATA ATATTGATGT AAATAGGGAA 
AAATTTAAAG GTATTTGTGG TGAAGGATTT ATAGAGAATA AAAAGGTTAT TTTATTAAAA 
CCTTTAACAT ATATGAATTT AAGTGGAGAA AGTATAAGAG AACTTGCTAA CTTTTATAAG 
TTAGAAGATG ATGAAATAAT AGTAGTTTAT GATGATATAA GTTTAGATAT AGGAAGATTA 
AGAATAAGAG AAAAAGGTAG TGCTGGTGGG CATAATGGAA TCAAGAGCAT AATACAAAAT 
CTTGGTGGAG ATAAATTCCC AAGGGTTAAA GTGGGTGTAG GACAACCTAA AGATAACTTA 
GTAAATCACG TTTTAGGAAA ATTCTCAAAG GAAGATAGGG AACATATAGA AAAGGTTATT 
CCAGTAGTAA GTGATGCAAT AGTTGAAATT GTAAAAAATG ATGCTAAGGA ATCAATGAAT 
AAATTTAATG GAGTTAATAT AGAATAG 

 

Protein sequence

MILIVGLGNP GKQYEQTRHN IGFDVIDYMA NKYNIDVNRE KFKGICGEGF IENKKVILLK 
PLTYMNLSGE SIRELANFYK LEDDEIIVVY DDISLDIGRL RIREKGSAGG HNGIKSIIQN 
LGGDKFPRVK VGVGQPKDNL VNHVLGKFSK EDREHIEKVI PVVSDAIVEI VKNDAKESMN 
KFNGVNIE