| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_2778 |
|---|
| Symbol | |
|---|
| ID | 4201322 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium perfringens ATCC 13124 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008261 |
|---|
| Strand | - |
|---|
| Start bp | 3040098 |
|---|
| End bp | 3041216 |
|---|
| Gene Length | 1119 bp |
|---|
| Protein Length | 372 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 30% |
|---|
| IMG OID | 638083646 |
|---|
| Product | peptidase T-like protein |
|---|
| Protein accession | YP_697151 |
|---|
| Protein GI | 110798716 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG2195] Di- and tripeptidases |
|---|
| TIGRFAM ID | [TIGR01883] peptidase T-like protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATAAATG AAAAAAGAGT TTTAGAAAGT TTTTTAGATT ATATCCAAAT AGATAGCGAA
ACTTATGAAG AAGGTAATTT TGCTAAAAGA TTAGAAAAGG ATTTAATGGA AGCTGGATTA
GAAGTTGAAT TTGATAAAAG TGGAGAAAAA ATAGGTTCAA ATACAGGAAA CTTAATAGCT
AAATTAAAAG GTAATGTAGA AGGAGAAACT ATTCTTTTTG CATGTCATAT GGATACTGTT
AAACCTGGTA AAGGAATAAA GCCAATAATA AAAGATGGAG TTATATATAG TGATGGGACA
ACTATATTAG GTGGAGACGA TAAAGGTGGA ATAGCTGCTA TAGTTGAAGC TTTAAGAGTA
ATAAAAGAAA ACAACATAGA CCATGCTAAT ATAGAAGTTG TATTTACAAT AGCTGAAGAA
ACAGGTCTTT TAGGAGCTAA AAATTTAGAT TATTCAAAAA TAAGTGCAAA AAAAGCATTC
CTTTTTGATA CAAGTGGAGA CCCAGGATTT ATAACTACAA TAGGACCTGC TCATGATACT
TTAAAGGTTA CTATAAAGGG AAAACCTGCA CATGCTGGAG TTTCACCTGA AGATGGAATA
AGTGCAATTT CCATAGCTTC AGATGCTATA GCAAACATGA AACTTTTAAG AGTAGATAAA
GATACTACTG CTAATATAGG AAAAATTTCA GGAGGAGTTG CTAATAATGT AGTTTGTCCT
GAAGTAATAA TAGATGCAGA AGCAAGAAGT ACAGTTACAG AAAAATTAGA TGCTCAAACA
AAACACATGG TAGAAACTTT TAAAGCTTCT GCTGAAAAAT TTGGTGGAGA AGTTAATATA
GAAGTAAATA GAATGTATGG TGCTTTTGTT ATAGATGATA ATGAAGATAT AGTTTTACAT
GCAAAGAGAG CATTTAAAAA CTTAGGAATA AATGGAGAAA CTAAAGCCTC AGGTGGTGGA
AGTGATACAA ATATCTTTAA CTGTAATGGC ATAAAGGCAG TTAATCTTTC AAGTGGTGAA
AGAAAGCCTC ATACTTTAGA GGAACATATG AAAATTGAAG ATTTAGGAAC AATATCAAAA
GTGGTTCTTG AATTAGTTAA AGAAAGTATA AATAAATAA
|
|---|
| Protein sequence | MINEKRVLES FLDYIQIDSE TYEEGNFAKR LEKDLMEAGL EVEFDKSGEK IGSNTGNLIA
KLKGNVEGET ILFACHMDTV KPGKGIKPII KDGVIYSDGT TILGGDDKGG IAAIVEALRV
IKENNIDHAN IEVVFTIAEE TGLLGAKNLD YSKISAKKAF LFDTSGDPGF ITTIGPAHDT
LKVTIKGKPA HAGVSPEDGI SAISIASDAI ANMKLLRVDK DTTANIGKIS GGVANNVVCP
EVIIDAEARS TVTEKLDAQT KHMVETFKAS AEKFGGEVNI EVNRMYGAFV IDDNEDIVLH
AKRAFKNLGI NGETKASGGG SDTNIFNCNG IKAVNLSSGE RKPHTLEEHM KIEDLGTISK
VVLELVKESI NK
|
|---|
| |