| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_2765 |
|---|
| Symbol | |
|---|
| ID | 4200984 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium perfringens ATCC 13124 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008261 |
|---|
| Strand | + |
|---|
| Start bp | 3023563 |
|---|
| End bp | 3024732 |
|---|
| Gene Length | 1170 bp |
|---|
| Protein Length | 389 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 31% |
|---|
| IMG OID | 638083630 |
|---|
| Product | amidohydrolase-like protein |
|---|
| Protein accession | YP_697143 |
|---|
| Protein GI | 110798920 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1473] Metal-dependent amidase/aminoacylase/carboxypeptidase |
|---|
| TIGRFAM ID | [TIGR01891] amidohydrolase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGACAGG AAGTTATTTC TTATTTATCT ACAGAAAAAG AAGCTCTCTT TAATCTTTGT
AAGTTTCTGC ATGATAATCC CGAAGATAGT TACAAAGAAT ATGACGCTTG CAAATATATA
TGTAATTTCC TAAGAGATAG AGATTTTGAT GTAAGAGAAA AATTTTTAGA TTTAGATACT
GCTTTCTATG CTAAGAAAGG AAATGGATAC CCTAAAATAT GCTTTTTATG CGAATATGAT
GCTATTAAAT CTAAGGGAGG ACATATAACA GGTCATAATC TTCTTACTAC TATATCAATT
ACAAGTGCCT TAGGATTAAG CAAGGTAATT GAAAAGTCTG GTGGAACAGT AATATTAATA
GGATGTCCTG GAGAGTATTT AGGTGGAACT AAGTCTACTT ATGTTAGACA AGGTATTTTT
GATGATATAG ATGTGGTATT AACAGCTCAC CCAGATATAG TAACCTCTGA AAGTGGTACT
TCAAAGGCAA TTATACCCCT AAAAGTAACT TTTAAAGGTC ATGATGGATT AAGTTTCTTA
GATTTTGATA GTTTTACATC TTTAGATGGT ACTATGCTAA CTTTTAATGT AATAAACGCT
TTATCTAAGG GCTTCTGTAA GAAAGCTAAC ATACACACTA TTTTATCTCA AGGAGGCGTT
ACACCTCTTC TAAGACCTGT TGAATCAGAA GGTAAATTAT ATATAAGAGC AGAAAGCACC
AAAACTGCAA AATGTATTGA AAATAAAATA AGAAACATTG TTGCTTGTAT TTCTGACACA
ATGAACTTAG AAAGTTGTGT TGAACTTTAT GAGCCACCTA ATGAAGAGCT TTTATCTAAT
CAAGTATTAA ATAGATTATA TAGTCATAAT TTAAAAGAAA ACGGAATAAT AAACATAGGA
AAACCAAGAG ATATAGATGC TGGTCTTTCA TTAGGAACTG TAAGTCACAA GGTACCTTGT
ATTCATCCTT ATATAAACAT AGTTGATAAT GTAAATATTG ATTATGGAAC TAAAGAATTT
GCAGATGCAA CAATATCATC CTTTGCTCAA GAACAAGCAC TTTCAGCTTC TTATGCCCTT
ATTTCAACAG CCTTAGATCT TATAGAAAGC GATTTTCTTC TTTCAGAGGT TAAAGAAACC
TTCAATATGT CTAAGGAAAA TTTATATTAA
|
|---|
| Protein sequence | MRQEVISYLS TEKEALFNLC KFLHDNPEDS YKEYDACKYI CNFLRDRDFD VREKFLDLDT
AFYAKKGNGY PKICFLCEYD AIKSKGGHIT GHNLLTTISI TSALGLSKVI EKSGGTVILI
GCPGEYLGGT KSTYVRQGIF DDIDVVLTAH PDIVTSESGT SKAIIPLKVT FKGHDGLSFL
DFDSFTSLDG TMLTFNVINA LSKGFCKKAN IHTILSQGGV TPLLRPVESE GKLYIRAEST
KTAKCIENKI RNIVACISDT MNLESCVELY EPPNEELLSN QVLNRLYSHN LKENGIINIG
KPRDIDAGLS LGTVSHKVPC IHPYINIVDN VNIDYGTKEF ADATISSFAQ EQALSASYAL
ISTALDLIES DFLLSEVKET FNMSKENLY
|
|---|
| |