| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_2758 |
|---|
| Symbol | |
|---|
| ID | 4203332 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium perfringens ATCC 13124 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008261 |
|---|
| Strand | - |
|---|
| Start bp | 3018435 |
|---|
| End bp | 3019340 |
|---|
| Gene Length | 906 bp |
|---|
| Protein Length | 301 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 30% |
|---|
| IMG OID | 638083623 |
|---|
| Product | PSP1 domain-containing protein |
|---|
| Protein accession | YP_697136 |
|---|
| Protein GI | 110801255 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1774] Uncharacterized homolog of PSP1 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATAGAAG TAATAGGAGT CAGATTTAAA AAAGCTGGTA AAATATATTA CTTTGGTCCT
AATGGTATAG AGATAAAGAA GGGTCAAAAC GTAATTGTTG AAACTGCTAG AGGTATTGAA
TTTGGAGAAT GTGTAATTGG TATAAGAAAA ATTAGTGAAG AGGATATCGT TGCACCATTA
AAATCTGTAT TAAGATTAGC TACAGAGGAA GATATAAATA AGCATAAGGA GAATAAAGCT
AAAGAGACAG AGGCTTTTGA AATATGCTTA AAGAAGATAG AAGAACATAA TTTAGTAATG
AAACTAATAG ATGTAGAATA TACATTTGAT AATAATAAGG TTATATTCTA CTTTACTGCA
GAGGGTAGAG TTGACTTTAG AGAATTAGTA AAAGATTTAG CAACTATATT TAAGACAAGA
ATAGAGCTTA GACAAATAGG GGTTAGAGAT GAGGCTAAAA TGATAGGTGG ACTTGGACCA
TGTGGAAGAC CTCTTTGTTG CTCTACATTC TTAGGAGACT TTGCTTCAGT TTCAATAAAA
ATGGCTAAGG AACAAAGTTT ATCACTAAAT CCAACTAAGA TATCAGGAAT ATGTGGAAGA
CTTATGTGTT GTTTAAATTA TGAGCAAAGC ACATATGAAG AAATAAGAAA AGAACTTCCT
AGAGTAGGAT CTGTAGTTGA GACTGAACTT GGAAAAGGTG AAGTAGTAGG TAACAACGTA
TTAAAGGAAT TAGTAAGAGT TAAATTACCA AGAAAAAATG AAGAGATTAT ACAGGATTTT
AAAATGTATG ATGTAAAATT AATCTCAGGT AGCTATGAAG GTGAAGTAGA GGATACAAAC
ATTAGATTAG AAATTACTGA TGAAGCGGAT AAAGCATTAA TTAAAAATCT AATAAAAGAT
AATTAA
|
|---|
| Protein sequence | MIEVIGVRFK KAGKIYYFGP NGIEIKKGQN VIVETARGIE FGECVIGIRK ISEEDIVAPL
KSVLRLATEE DINKHKENKA KETEAFEICL KKIEEHNLVM KLIDVEYTFD NNKVIFYFTA
EGRVDFRELV KDLATIFKTR IELRQIGVRD EAKMIGGLGP CGRPLCCSTF LGDFASVSIK
MAKEQSLSLN PTKISGICGR LMCCLNYEQS TYEEIRKELP RVGSVVETEL GKGEVVGNNV
LKELVRVKLP RKNEEIIQDF KMYDVKLISG SYEGEVEDTN IRLEITDEAD KALIKNLIKD
N
|
|---|
| |