Gene CPF_2755 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_2755 
Symbol 
ID4202034 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand+ 
Start bp3015592 
End bp3016245 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content26% 
IMG OID638083620 
Productputative zinc-dependent hydrolase 
Protein accessionYP_697133 
Protein GI110800405 
COG category[R] General function prediction only 
COG ID[COG2220] Predicted Zn-dependent hydrolases of the beta-lactamase fold 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.332124 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATATTT ATTGGTTAGG TCATTCTTGT TTTTTAATAA AAACTAATCT TGGAAAACGT 
ATATTAATGG ATCCATTTGA TATAGATATA GGATATATTC CCTATAAAGG TGATGTGGAC 
TTAGTTACTA TAAGTCATAT GCACTTCGAT CATAATTGTA CAAAATACAT TAATGATGAA 
GCAAAAGTAT TAACAGACTT AGTTGATTAT CAAAATACCT TTTGCAAAGT TAAATCATAT 
TTATCTTTTC ATGATGATTG CTTTGGATTA AAACGTGATA AAAACTTCAT ATTTAAAATT 
CTTTGTGATG ACATAACACT TTGTCACTTA GGAGATTTAG GACATATACT TTCTTCTAAA 
GTTATAAAGC AACTAGGCCA TATAGATATA TTATTTGTTC CTGTAGGAGA ACATTTAACT 
ATTTCTGTAG AAAATCTAAA AAAGGTAATC CTAGATATAA ATCCTGGTTA CGTTATTCCA 
ATGCATTATA AAACTGCAAA ATTAAGTTTC TATTTAAATA CTGTAGATAA ATTTCTAATG 
GAAATGAAAG GTTTTAAAAT AACTCATGAT CAGGTTTTAT CAGTAAATCC TGAATCAATT 
CCTGAAAATA CTACAATAAA AATATTAGAA CTTACTTCTG AAGATATGAT ATAA
 
Protein sequence
MNIYWLGHSC FLIKTNLGKR ILMDPFDIDI GYIPYKGDVD LVTISHMHFD HNCTKYINDE 
AKVLTDLVDY QNTFCKVKSY LSFHDDCFGL KRDKNFIFKI LCDDITLCHL GDLGHILSSK 
VIKQLGHIDI LFVPVGEHLT ISVENLKKVI LDINPGYVIP MHYKTAKLSF YLNTVDKFLM 
EMKGFKITHD QVLSVNPESI PENTTIKILE LTSEDMI