Gene CPF_2709 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_2709 
SymbolrplV 
ID4203954 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand
Start bp2971712 
End bp2972047 
Gene Length336 bp 
Protein Length111 aa 
Translation table11 
GC content35% 
IMG OID638083575 
Product50S ribosomal protein L22 
Protein accessionYP_697089 
Protein GI110800033 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0091] Ribosomal protein L22 
TIGRFAM ID[TIGR01044] ribosomal protein L22, bacterial type 


Plasmid Coverage information

Num covering plasmid clones76 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAGCTA AAGCTATAGC TAAATATGTA AGAATGTCTC CAACTAAAGT AGGAGTTGTT 
CTTGATTTAA TAAGAGGAAA GAACGTAAAC GAAGCTTTCG CAATTTTAAA ATATACTCCA
AGAGATGCTG CTGAGGTTAT AAGCAAAGTT TTAAAATCAG CGGTAGCTAA TGCGGAGAAC
AATCACGAAT TAGATGCTAA CAGATTATTC GTTGCAGAAG CACATGTAGG TCACGGACCA
ACATTAAAAA GATTCAGACC AATGGATCAT GGTAAAGCAT TCAGAATAAA CAAGAGAACA
AGTAACATAA CACTTGTTGT TAAAGAAAGA GCTTAA
 
Protein sequence
MEAKAIAKYV RMSPTKVGVV LDLIRGKNVN EAFAILKYTP RDAAEVISKV LKSAVANAEN 
NHELDANRLF VAEAHVGHGP TLKRFRPMDH GKAFRINKRT SNITLVVKER A