| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_2687 |
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| Symbol | rpsK |
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| ID | 4202027 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens ATCC 13124 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008261 |
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| Strand | - |
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| Start bp | 2961498 |
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| End bp | 2961893 |
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| Gene Length | 396 bp |
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| Protein Length | 131 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 638083553 |
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| Product | 30S ribosomal protein S11 |
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| Protein accession | YP_697067 |
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| Protein GI | 110800360 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0100] Ribosomal protein S11 |
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| TIGRFAM ID | [TIGR03632] 30S ribosomal protein S11 |
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Plasmid Coverage information |
| Num covering plasmid clones | 49 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCAGCTC AAAAAGTTAA AAAAACTAGA AGAAGAAAAG AAAGAAAAAA TGTTGAGCAT
GGTGCAGCAC ACATCCAATC AACATTCAAT AACTCAATAG TTACTTTAAC TGATGCAAAA
GGAAATGCAT TAGCATGGGC AAGTGCTGGT GGCCTTGGAT TCAAAGGTTC AAGAAAGAGC
ACACCATTTG CAGCTCAAAT GGCAGCTGAA ACAGCAGCTA AAGCAGCTAT GGAACACGGA
TTAAAAAGCG TTGAGGTTTA CGTAAAAGGA CCAGGTGCTG GAAGAGAAGC AGCTATAAGA
AGCTTACAAG CAGCTGGATT AGAAGTTACT TTAATAAAAG ATGTAACTCC AATCCCACAC
AATGGATGTA GACCACCAAA AAGAAGAAGA GTTTAG
|
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| Protein sequence | MAAQKVKKTR RRKERKNVEH GAAHIQSTFN NSIVTLTDAK GNALAWASAG GLGFKGSRKS
TPFAAQMAAE TAAKAAMEHG LKSVEVYVKG PGAGREAAIR SLQAAGLEVT LIKDVTPIPH
NGCRPPKRRR V
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