| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_2676 |
|---|
| Symbol | cwlD |
|---|
| ID | 4203691 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium perfringens ATCC 13124 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008261 |
|---|
| Strand | - |
|---|
| Start bp | 2951774 |
|---|
| End bp | 2952445 |
|---|
| Gene Length | 672 bp |
|---|
| Protein Length | 223 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 30% |
|---|
| IMG OID | 638083542 |
|---|
| Product | N-acetylmuramoyl-L-alanine amidase |
|---|
| Protein accession | YP_697056 |
|---|
| Protein GI | 110799813 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0860] N-acetylmuramoyl-L-alanine amidase |
|---|
| TIGRFAM ID | [TIGR02883] N-acetylmuramoyl-L-alanine amidase CwlD |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.0157627 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGAAAA TAATGAAAAT AGTGTCAATT ATGATGATAT CTTTTTTAGT ATTAAATATT
AGCTTATTAA AGGTTAATGC AGAAGAAAAT AATAAGGTAA TAGTTATTGA CCCAGGTCAT
GGAGGCATAG ATGGTGGCGC AAAGAGTGAA AATGGAGTAA TTGAGAAGGA CATTAATTTA
TCAATATCAC TTAAAACAAA AGCTGCCTTA GAGAGTAAGG GATATAAAGT CATAATGACT
AGAAGTGAGG ATGTAGGACT ATATACTGAG GGCAAAAAGG TTAGAGAAAA GAAAATAGAA
GACTTAGGAA ATAGAGTTAA GATTAAAAAA GAAAATAAGT GTGATGCTTT TATAAGCATA
CATCAAAATA TGTTTCCTCA AAAGAATTGT AAAGGGGCAC AAGTATGGAG TGCCAACAAT
GAACCAAGTC AAAAGCTAGG CAAAATAATA CAACAAAAAT TTAAGGAAGA AGTTGACCAA
AATAATAAGA GGGAAGCAAA AGTTGCAAAA AAAGAATATA AGATTTTAAA TGATGGATAT
GAAGGAGCTT CTGTAATAGT TGAATGTGGT TTCTTATCTA ATCCAGAAGA ATGCGAACTA
TTAGGTAAAG AAGATTATCA AAATAAAATT GCAAATACCT TAGCAAATGC TATAGATGAA
TATTTTAAAT AA
|
|---|
| Protein sequence | MKKIMKIVSI MMISFLVLNI SLLKVNAEEN NKVIVIDPGH GGIDGGAKSE NGVIEKDINL
SISLKTKAAL ESKGYKVIMT RSEDVGLYTE GKKVREKKIE DLGNRVKIKK ENKCDAFISI
HQNMFPQKNC KGAQVWSANN EPSQKLGKII QQKFKEEVDQ NNKREAKVAK KEYKILNDGY
EGASVIVECG FLSNPEECEL LGKEDYQNKI ANTLANAIDE YFK
|
|---|
| |