| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_2655 |
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| Symbol | hydA |
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| ID | 4202993 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens ATCC 13124 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008261 |
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| Strand | - |
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| Start bp | 2926027 |
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| End bp | 2927745 |
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| Gene Length | 1719 bp |
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| Protein Length | 572 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 638083521 |
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| Product | iron hydrogenase |
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| Protein accession | YP_697035 |
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| Protein GI | 110799871 |
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| COG category | [C] Energy production and conversion
[R] General function prediction only |
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| COG ID | [COG1034] NADH dehydrogenase/NADH:ubiquinone oxidoreductase 75 kD subunit (chain G)
[COG4624] Iron only hydrogenase large subunit, C-terminal domain |
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| TIGRFAM ID | [TIGR02512] hydrogenases, Fe-only |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATAAAA TAATAATCAA TGATAAGACT ATCGAATTTG ATGGTGATAA GACGATACTT
GACTTAGCAA GAGAGAATGG ATTTGACATT CCAGTGCTTT GTGAGTTAAA AAATTGCGGA
AACAAAGGAC AATGTGGAGT TTGTCTTGTT GAGCAAGAAG GAAATGATAG ACTATTAAGA
TCTTGTGCAA TAAAAGCTAA AGATGGAATG GTTATTAAAA CTGATAGTGA AAAAGTACTA
GAAGCTAGAA AAGAAAGAGT TGCAGAACTT TTAGATGAGC ATGAGTTCAA ATGTGGACCA
TGTAAAAGAA GAGAGAATTG TGAATTCTTA AAACTTGTAA TTAAAACAAA GGCAAGAGCT
CACAAACCAT TTGTAGTTGC AGATAAATCA GAATATGTAG ATGACAGAAG TAAATCAATA
GTTTTAGATA GAAGTAAATG TGTTAAATGT GGTAGATGTG TTGCGGCATG CAGAACAAGA
ACTGCTACTA ACTCAATAAA ATTCCACAGA ATTGATGGAG TAAGATTAGT AGGACCAGAA
GAATTAAAAT GTTTCGACGA TACAAATTGT TTATTATGTG GACAATGTAT AGCTGCTTGC
CCAGTTGATG CATTATCAGA AAAATCACAT ATTGAAAGAG TTCAAGAGGC ATTAAATGAT
CCAGAAAAGC ATGTAATAGT TGCTATGGCA CCAGCTGTAA GAACATCAAT GGGTGAATTA
TTCAAGATGG GTTATGGACA AGATGTTACT GGAAAATTAT ATACTGCTTT AAGAGAATTA
GGTTTTGATA AAGTATTTGA TATAAACTTC GGTGCTGATA TGACAATAAT GGAAGAAGCT
ACTGAGCTTA TAGAAAGAAT AAAAAATAAC GGACCTTTCC CAATGTTAAC TTCATGTTGT
CCATCATGGG TTAGAGAAGT TGAAAACTAC TTCCCAGAAT TAGTAGAAAA TCTTTCATCA
GCTAAATCAC CACAACAAAT ATTTGGTGCA GCATCAAAAA CTTATTATCC ACAAGTTGCT
GATATAGATC CTAAAAAAGT ATTTACAGTA ACTGTAATGC CTTGTACTTC TAAAAAATTC
GAGGCTGATA GACCTGAAAT GGAAAACGAA GGAATAAGAA ATATAGATGC AGTTATAACA
ACTAGAGAGT TAGCTAGAAT GATAAAAGCT GCTAAAATAG ATTTTGCTAA ATTAGAAGAT
GGTGAAGTGG ATCCAGCTAT GGGTGAGTAC ACTGGAGCAG GTGTTATATT TGGAGCTACT
GGTGGAGTTA TGGAAGCTGC TTTAAGAACA GCTAAAGATT TCATGGAAAA TGACAACTTA
GATAATGTAG ATTACGAAGC TGTTAGAGGA TTAGCTGGAA TAAAAGAAGC TGAAGTAGAA
ATAGCAGGAA ATGAATATAA ATTAGCTGTT GTAAGTGGAG CTGCTAATGT ATTTGAACTA
GTTAAGTCTG GTAAAATAAA TGACTACCAC TTCATCGAAG TAATGGCATG TCCTGGTGGA
TGTGTTAATG GTGGAGGACA ACCACACATC TCAGCTGAAG ATAGTGATAA AATGGATATT
AGAGAAGTAA GAGCTTCTGT TCTTTACAAT CAAGATAAGA ATTTAGAGAA GAGAAAATCA
CATCAAAACT CAGCTTTATT AAAAATGTAT GAAAGCTACA TGGGTAAACC AGGTCATGGA
AGAGCTCATG AGTTATTACA CATGAAATAT AAAAAATAA
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| Protein sequence | MNKIIINDKT IEFDGDKTIL DLARENGFDI PVLCELKNCG NKGQCGVCLV EQEGNDRLLR
SCAIKAKDGM VIKTDSEKVL EARKERVAEL LDEHEFKCGP CKRRENCEFL KLVIKTKARA
HKPFVVADKS EYVDDRSKSI VLDRSKCVKC GRCVAACRTR TATNSIKFHR IDGVRLVGPE
ELKCFDDTNC LLCGQCIAAC PVDALSEKSH IERVQEALND PEKHVIVAMA PAVRTSMGEL
FKMGYGQDVT GKLYTALREL GFDKVFDINF GADMTIMEEA TELIERIKNN GPFPMLTSCC
PSWVREVENY FPELVENLSS AKSPQQIFGA ASKTYYPQVA DIDPKKVFTV TVMPCTSKKF
EADRPEMENE GIRNIDAVIT TRELARMIKA AKIDFAKLED GEVDPAMGEY TGAGVIFGAT
GGVMEAALRT AKDFMENDNL DNVDYEAVRG LAGIKEAEVE IAGNEYKLAV VSGAANVFEL
VKSGKINDYH FIEVMACPGG CVNGGGQPHI SAEDSDKMDI REVRASVLYN QDKNLEKRKS
HQNSALLKMY ESYMGKPGHG RAHELLHMKY KK
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