| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_2645 |
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| Symbol | |
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| ID | 4201441 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens ATCC 13124 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008261 |
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| Strand | - |
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| Start bp | 2910377 |
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| End bp | 2912395 |
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| Gene Length | 2019 bp |
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| Protein Length | 672 aa |
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| Translation table | 11 |
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| GC content | 29% |
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| IMG OID | 638083511 |
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| Product | putative glycogen debranching enzyme, type |
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| Protein accession | YP_697025 |
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| Protein GI | 110800570 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3408] Glycogen debranching enzyme |
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| TIGRFAM ID | [TIGR01561] glycogen debranching enzyme, archaeal type, putative |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGTTTG GAAAAAAAGA TTGGATTAGT TATGACAGAG GGATAGAAAA AGAGTGGATG
CTTACTAATG GCATAAGTGG ATTTTGTGGA GGAACTGCTA TAGGAGCAAA CTGCAGAAAA
TATCAGGGGT TATTATTAGC ATGTACTAAT TCTCCAGAAG AGAGATACAT GATTCTTTCA
AATTTAAATG AGGAAATAAA TATTAATGGA AAGCTTCACC AGTTGAGTTC TTGTAAATAT
ACAGATAAAA TAGTGGATGG CTTTAAAAAT CTTCAAGGAT TTTATTATGA TGGACTACCT
TATTTTAGAT TTTTTGTAGA TGGAGTAGTT ATAAATAAAA AGATTGCTAT GGAATATGGA
AAGAATACTG TAGTAATAGA ATATGACATA TTAAACGGAA GTAAAGAATC AAAAATAAAT
ATTGAACCAT TATTTACTTT TAGAAATCCA GGAGTATGTA GTGGAGAAGA AAATTTAAAG
TTTTCAAAAT CTGTGGATAA AAATAAAATT CAACTTACTC CACAGCTAAA TGAGGACATA
AATATAAGAT TTTTTACTTA TGGTGGAAAA ATAGTAGATA AAACTGATAA AATTGTGGAT
AAAATTTATT ATGATGTGGA TAAAAGTACA GGTGATAAGT TTGTGGATAA ATGTTACATT
CCAGGAACTG TTGAAATAAA TTTAAATCCT AAGGAAAGAA AAAAGATTTA TTTACTTTGT
ACTATAGAAA ATGAAGAGAA TTTTGACTGT GAAAAAATAA TAGAAAATGA AGAGAAAAGA
ATAAATAATC TTAAAAATAC CTTTAATGAT TCAAGAATTT TAGCTAAATA TCTTCCTATT
GCAGGGGATC AATTTATAGT AAATAGAGAA TCTATAAAGG GAAAAACAAT TTTAGCTGGC
TACCCTTGGT TTTTAGATTG GGGAAGAGAT GCTATGATTG CTATTAATGG ATTAACTTTG
TCAACTGGAA GATTAGAAGA TGCTAAAGAT ATTATAAGAA GTTTTAGCCT TTATGAGAAA
GATGGATTAA TCCCAAATAT GTTCCCAGGA AAAGGACAAG AGCCACTTTA TAATACAGTA
GATGCTTCCT TATGGTTTAT AAATGCAGTT TATAATTATT TGCTTTATGC TAATAGTTAC
GAAGCTTTAG AGTTTGTTGA GAAAGAAGTT TATAAAACTA TAAAAAATAT AATAAAGGCT
TATAAAGAAG GTACTAAGTT CTCAATAAAA ATGGATGAAG AGGATTCTTT AATAAATGCT
GGATCAGGAT TAGATCAGGT AACTTGGATG GATGTTAGAG TAAATGGTAT AGTGGTTACT
CCTAGACATG GTAAACCAGT TGAAATAAAT GCTTTATGGT ATAATGCCTT AAAAATAGCA
GGCTTATTAA AAGATAAGTT TGAAAAAGAT GAAAAGAATG AGTACGAAGA GCTAGCGCAA
AAGGTTAAAG ATTCATTTAA TAAGGCTTTT TGGAATGAGG ATGGAAAGTA TCTTTACGAT
GTTGTAAATC ATAATGAGAA GGATCATAGC TTAAGACCTA ATCAGATTTG GGCAGTATCA
TTACCTTTTA CAATGTTAGA TAGAGAAAAA GAAAAGTATA TTGTTCAAAA GGTTTTTGAA
GAATTATATA CTCCCTATGG ATTAAGAAGT CTAAGTAGAG ACCATAAGGA TTATCATGGA
ATTTATATAG GAAAGCTTTT TGATAGAGAT ATGGCCTATC ATCAAGGAAC AACATGGGCA
TTTCCTCTTG GAGGATTTTT CACAGCTTAT TGTAAGGTAA ATGATTATTC TAAAGAAGCT
GTAGAGTTAG TTGATTCTTT AATGAGAGAT ATGGAAGATC ATATTAAAGA TCAATGCTTA
GGAAGTATTG CTGAAATTTT TGATGGTGAT AATCCTTATA AAGCTAGGGG ATGCTATGCT
CAAGCTTGGA GTGTTGGAGA AATGCTTAGA GTTTATTATG AGGATATTCT AGGAAACCAT
AAAAAATTAA AAAAAGTCCA CAAAGATATA TTTATATAA
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| Protein sequence | MKFGKKDWIS YDRGIEKEWM LTNGISGFCG GTAIGANCRK YQGLLLACTN SPEERYMILS
NLNEEINING KLHQLSSCKY TDKIVDGFKN LQGFYYDGLP YFRFFVDGVV INKKIAMEYG
KNTVVIEYDI LNGSKESKIN IEPLFTFRNP GVCSGEENLK FSKSVDKNKI QLTPQLNEDI
NIRFFTYGGK IVDKTDKIVD KIYYDVDKST GDKFVDKCYI PGTVEINLNP KERKKIYLLC
TIENEENFDC EKIIENEEKR INNLKNTFND SRILAKYLPI AGDQFIVNRE SIKGKTILAG
YPWFLDWGRD AMIAINGLTL STGRLEDAKD IIRSFSLYEK DGLIPNMFPG KGQEPLYNTV
DASLWFINAV YNYLLYANSY EALEFVEKEV YKTIKNIIKA YKEGTKFSIK MDEEDSLINA
GSGLDQVTWM DVRVNGIVVT PRHGKPVEIN ALWYNALKIA GLLKDKFEKD EKNEYEELAQ
KVKDSFNKAF WNEDGKYLYD VVNHNEKDHS LRPNQIWAVS LPFTMLDREK EKYIVQKVFE
ELYTPYGLRS LSRDHKDYHG IYIGKLFDRD MAYHQGTTWA FPLGGFFTAY CKVNDYSKEA
VELVDSLMRD MEDHIKDQCL GSIAEIFDGD NPYKARGCYA QAWSVGEMLR VYYEDILGNH
KKLKKVHKDI FI
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