| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_2643 |
|---|
| Symbol | |
|---|
| ID | 4203003 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium perfringens ATCC 13124 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008261 |
|---|
| Strand | - |
|---|
| Start bp | 2908982 |
|---|
| End bp | 2909281 |
|---|
| Gene Length | 300 bp |
|---|
| Protein Length | 99 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 28% |
|---|
| IMG OID | 638083509 |
|---|
| Product | TrpR-like protein YerC/YecD |
|---|
| Protein accession | YP_697023 |
|---|
| Protein GI | 110799881 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4496] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | [TIGR01321] trp operon repressor, proteobacterial
[TIGR02531] TrpR-related protein YerC/YecD |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATGGAG TACAATCTAA ACTAAAAGGT AAGGATTTAG ATTTTTTATT TGAGGCTATA
TTAAAGTTAG AAGATATAAA TGAATGTTAT AATTTTTTTG AAGATATATG CACTATTTCA
GAGCTAAAAG CATTAGCGCA AAGATTACAT GTTGCAAAAA TGCTTAGGGA GAAAAAAACA
TATACTGAAA TTGCAGAAGA GACTAAGGCT TCAACAGCTA CTATAAGTAG AGTAAATAGA
TGTTTAAACT ATGGAGCAGA TGGTTACAAT AATATCTTAA ATAGATTAGA TGAGAAATAA
|
|---|
| Protein sequence | MNGVQSKLKG KDLDFLFEAI LKLEDINECY NFFEDICTIS ELKALAQRLH VAKMLREKKT
YTEIAEETKA STATISRVNR CLNYGADGYN NILNRLDEK
|
|---|
| |