| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_2617 |
|---|
| Symbol | |
|---|
| ID | 4203077 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium perfringens ATCC 13124 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008261 |
|---|
| Strand | - |
|---|
| Start bp | 2886284 |
|---|
| End bp | 2887597 |
|---|
| Gene Length | 1314 bp |
|---|
| Protein Length | 437 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 31% |
|---|
| IMG OID | 638083484 |
|---|
| Product | Na+/H+ antiporter family protein |
|---|
| Protein accession | YP_697007 |
|---|
| Protein GI | 110799281 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1757] Na+/H+ antiporter |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAG GAAAGTTTTC AGCATTATTA CCATTAATAA TTTTTGTATC GATTTATTTG
GGAACTTCAT TAGTAATGAA AGATTTCTAC TCTGTATCTG TTTTAGTTCC AGGAATAATT
GCAGTTTTAT TTGGAATATT TACAAATAGA AAAAGAGGAC TTGAAAAGAA CATAGAGATA
TTTTGTAAGG GGGCTGGTAA TAGCAATATA ATTTTAATGT GCTTAATCTT TATATTAGCT
GGTGCCTTTG CAGAGGTTGC TAAAAATATG GGGGCTGTAG AATCTACAGT AAATTTAGGG
CTAACAATAT TACCTAAAAA TATATTAGTA GCAGGAATAT TTATAATATC ATCATTTATA
GCTATATCTT TAGGAACGTC AATGGGAACA ATAGCTGCTA TAGTTCCAAT AGCAATGGGA
ATTTCAGATA AGACTAATAT CGCATTACCA CTTATAGTTG GGGCAGTAGT AGGTGGAGCT
ATGTTTGGGG ACAATCTATC AATGATTTCT GATACAACAA TAGCAGCAAC AAAAACTCAA
GGATGTGAAA TGAAGGATAA GTTTAAAATA AACTTTAAGG TTATATTACC AGCTGCTATC
TTAGTAATTG TAATATATAC ATTCTTAGGA AGTGGGGCTA ATACATCAGT AGGCCAATAC
GATTATAATT TTATTAAGAT TATTCCTTAC TTAGGTATTT TAATAGCTGC ATTAATGGGG
GCTAATGTAA TTGCTATATT ATCAGGTGGG ATAGTATTAG CTGGAGCAAT TGGATTCTTT
ACAGGATCTT TAGATTTAAA GACTTTCTTT ACTTCAATAT CAACTGGTAT AGGGGGAATG
AGTGAACTTA TATTAATTTC AATAATAATT GGGGGAATTG TTGAAATAAT AAAAGAAAAT
GGTGGTATAG ACTATGTATT AAACTTAGTT ACTAAGAGAA TCAATGGCAA AAAAGGGGCT
GAATTTGGTA TTGGATTATT AGTAAGCTTA GTTGATGCAT GTACTGCAAA TAATACTATT
GCTATAGTTA CAGTTGGACC TTTAGCAAAG GATATTTCAG ATGAATATAA CTTAGATTCA
AAAAGAATTG CAGGAATATT AGATATGTTC TCTTGTGCAG TTCAGGGAAT AATTCCATAT
GGAGCACAAT TAATGTCAGC GGCGGCTTTA ACTGGATTAA GTTCATTTGA AATAATGAAA
TTTTTATTCT ATCCATATTT AATGGGTATA AGTGCAATAG CATTCATAGC ATTTTTCCAA
AAGAAAGAAA GTGCTGAAAA AAGTGGGGAG TTAAATGCTA TAGCAGTTGA ATAA
|
|---|
| Protein sequence | MKKGKFSALL PLIIFVSIYL GTSLVMKDFY SVSVLVPGII AVLFGIFTNR KRGLEKNIEI
FCKGAGNSNI ILMCLIFILA GAFAEVAKNM GAVESTVNLG LTILPKNILV AGIFIISSFI
AISLGTSMGT IAAIVPIAMG ISDKTNIALP LIVGAVVGGA MFGDNLSMIS DTTIAATKTQ
GCEMKDKFKI NFKVILPAAI LVIVIYTFLG SGANTSVGQY DYNFIKIIPY LGILIAALMG
ANVIAILSGG IVLAGAIGFF TGSLDLKTFF TSISTGIGGM SELILISIII GGIVEIIKEN
GGIDYVLNLV TKRINGKKGA EFGIGLLVSL VDACTANNTI AIVTVGPLAK DISDEYNLDS
KRIAGILDMF SCAVQGIIPY GAQLMSAAAL TGLSSFEIMK FLFYPYLMGI SAIAFIAFFQ
KKESAEKSGE LNAIAVE
|
|---|
| |