| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_2615 |
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| Symbol | |
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| ID | 4202035 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens ATCC 13124 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008261 |
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| Strand | - |
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| Start bp | 2884611 |
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| End bp | 2885288 |
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| Gene Length | 678 bp |
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| Protein Length | 225 aa |
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| Translation table | 11 |
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| GC content | 32% |
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| IMG OID | 638083482 |
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| Product | sortase family protein |
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| Protein accession | YP_697005 |
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| Protein GI | 110800406 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3764] Sortase (surface protein transpeptidase) |
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| TIGRFAM ID | [TIGR01076] LPXTG-site transpeptidase (sortase) family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.209279 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGTGGGGAA AAATTAGAAA TGTATTAGGT ATTCTTTTAA TAGTGGCAGG AGTATCACTT
ATTGGAGTAA CTATTTGGAT GAAATATGAT ACTTATAGAC AGCAGCAAGC TGTTTTAGAT
AGTTTTAGAA ATTTACAGTT TGATGTTCCA GAGGGTGAAA AGAAAGATGC TGATGTGTTA
GAAGAAGAAA ATACTAAGGA AAATACTAAA GAAAATAGCG ATGAAAAGAA TAAAGCTGAT
AAGGTTGAAG TTGAAAAAGA CAAAAAGCCA GAAAAAGCAC AACTTGAAGA GGGAAAAGGA
ATAGGTATTT TAAATATTCC AAAGATAAAC TTAGAAATAG GTATAATAGA AGGCGTTAGC
TATGAAGATA TAAAGTATGT AGTAGGTCAT TTTCCTGGGT CACCAATGCC AGGGGAAAAA
GGTAATTTCT CCATAGCAGG ACATAGAATA TCATATTTTG GACAAGCTTT TAAGGATATT
GATAAGCTTG AAAAAGGGGA TAAAGTCAAA GTTACTTACA ATGGAAAAGA ATATACTTAT
GAAATAACTG ATATGTATGA GGTTACTCCA AATGAAACTG AGGCTTTAAA TCCAACAAAA
GATGCTACTA TAACTATAGT TACATGTACA ACTGACGCTA AAAATAGGGT TATAGTAAAA
GGAAAGTTAG TGGAATAA
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| Protein sequence | MWGKIRNVLG ILLIVAGVSL IGVTIWMKYD TYRQQQAVLD SFRNLQFDVP EGEKKDADVL
EEENTKENTK ENSDEKNKAD KVEVEKDKKP EKAQLEEGKG IGILNIPKIN LEIGIIEGVS
YEDIKYVVGH FPGSPMPGEK GNFSIAGHRI SYFGQAFKDI DKLEKGDKVK VTYNGKEYTY
EITDMYEVTP NETEALNPTK DATITIVTCT TDAKNRVIVK GKLVE
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