| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_2609 |
|---|
| Symbol | |
|---|
| ID | 4201906 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium perfringens ATCC 13124 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008261 |
|---|
| Strand | - |
|---|
| Start bp | 2877009 |
|---|
| End bp | 2878388 |
|---|
| Gene Length | 1380 bp |
|---|
| Protein Length | 459 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 32% |
|---|
| IMG OID | 638083476 |
|---|
| Product | glycosy hydrolase family protein |
|---|
| Protein accession | YP_696999 |
|---|
| Protein GI | 110801305 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2723] Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAATATA CTTTCCCAGA AAACTTTTGG TGGGGAGCTG CAACTTCAGG ACCTCAGTCA
GAAGGTAGGT TTAATAAAAA ACATGATAAT GTATTTGATC ACTGGTTCGA TATAAATCCA
GAGTTATTTC ACAATGGTAT AGGACCAAAT ATAGCATCAA ATTTTTATAA TAGTTACAAA
GAAGATTTAG CAATGCTAAA AGAAATTGGG TTAAATTCAT TTAGAACTTC AATTCAATGG
ACAAGGTTAA TTAAAGATTT TGAAACTGGT GAACCAGATG AAGATGGAGT GAGATTTTAT
AATGGTGTAA TAGATGAATG TTTAGCAAAT GGAATAGATA TAATCATGAA TTTACATCAC
TTTGATCTTC CTGTTGAATT ATATGATAAA TATGGTGGAT GGGAATCAAA GCATGTTGTA
GAATTATTTT CGAAATTTGC TAAGACTGCC TTTAGTTTAT TTGGTGATAG GGTTAAGAAG
TGGGCTACGT TTAATGAACC TATAGTTATT ATTGAAGGAC AGTTTTTATA TAAATGGCAT
TATCCTTGTA TAGTTGATGG AAAAAGAGGG CTTCAAGCTG CCTATAATAT AGCATTAGCT
TCTGCTAGAG CCATAGAAGA GTATAGAAAA TTAGGACAAG ATGGAGAAAT AGGAATAATA
GTTAACTTAA CGCCAGCATA TCCAAGAAGT GAGTCAAAAG AAGATTTAAG AGCTGCTGAA
ATTGCCAATG CTTTCTTCAA TGAGTTATTC TTAGATCCAG CAACTAAAGG AGAATTTCCT
AAGAACTTAG TTGAGGTTTT AGAAAAAGAT GGAGTAATGT GGAATTCTAC TAAGGAAGAA
TTACAGGTTA TAAAAAATAA TACTGTGGAT TTCTTAGGGG TAAACTACTA TCAACCAAGA
AGAGTTAAAG CTAGAGAAGA GGAATATGGT GGAGAAACAT GGGCTCCAGA AAAATATTTT
GATAATTATG ATATGCCAGG AAAGAGAATG AATCCTCATA GAGGATGGGA AATATATCCT
AAGGCAATTT ATGATATAGC TAAAAATGTG CAAGATAACT ATGGCAACAT AAAATGGTTC
ATTTCAGAGA ATGGAATGGG TGTTGAAGGC GAAGAAAAAT TCAAAAATGC TGAAGGTATA
ATTGAAGATG ATTATAGAAT TGAATTCATA ATAGAGCATT TAGAATGGCT TCATAAGGCT
ATTGAAGAGG GTTCAAATTG TGTGGGATAT CATTTATGGA CTCCAATAGA TTGTTGGTCA
TGGTTAAATT CATATAAAAA TAGATATGGA TTTATATCAT TAGATTTAGA AACTCAAAAG
AAAACTATTA AAAAATCAGG AAGATGGATA AAAGAAGTTT CTAAGAATAA TGGTTTTTAA
|
|---|
| Protein sequence | MKYTFPENFW WGAATSGPQS EGRFNKKHDN VFDHWFDINP ELFHNGIGPN IASNFYNSYK
EDLAMLKEIG LNSFRTSIQW TRLIKDFETG EPDEDGVRFY NGVIDECLAN GIDIIMNLHH
FDLPVELYDK YGGWESKHVV ELFSKFAKTA FSLFGDRVKK WATFNEPIVI IEGQFLYKWH
YPCIVDGKRG LQAAYNIALA SARAIEEYRK LGQDGEIGII VNLTPAYPRS ESKEDLRAAE
IANAFFNELF LDPATKGEFP KNLVEVLEKD GVMWNSTKEE LQVIKNNTVD FLGVNYYQPR
RVKAREEEYG GETWAPEKYF DNYDMPGKRM NPHRGWEIYP KAIYDIAKNV QDNYGNIKWF
ISENGMGVEG EEKFKNAEGI IEDDYRIEFI IEHLEWLHKA IEEGSNCVGY HLWTPIDCWS
WLNSYKNRYG FISLDLETQK KTIKKSGRWI KEVSKNNGF
|
|---|
| |