| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_2599 |
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| Symbol | hsdM |
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| ID | 4201458 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens ATCC 13124 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008261 |
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| Strand | - |
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| Start bp | 2866431 |
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| End bp | 2867948 |
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| Gene Length | 1518 bp |
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| Protein Length | 505 aa |
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| Translation table | 11 |
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| GC content | 31% |
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| IMG OID | 638083466 |
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| Product | type I restriction-modification system, M subunit |
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| Protein accession | YP_696989 |
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| Protein GI | 110799934 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0286] Type I restriction-modification system methyltransferase subunit |
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| TIGRFAM ID | [TIGR00497] type I restriction system adenine methylase (hsdM) |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0274218 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCAAAGC TTACACTACA AGAATTAGAA TCAACACTTT GGCAATGTGC TGATATTCTT
AGAGGAGAAT TATCAGCTGC TGAGTACAAA GATTATATAT TTGGAATGTT ATTTTTAAAA
AGATTAAATG ATGAGTTTGA TGAGGAAAGA GAAGAGAGAA GAAAAGAGTT TTTAGAAGAT
GGATTAGATA AAGAGGAGGT AATAGAACTT TTAGAAGACC CTAGTATTTA TGAGACTTTC
TTTGTTCCAG AGCAAGCAAG ATGGGAGAAA CTTAGAAATT TAACTTTAAA TATAGGACCA
GAATTAGATA AAGCATTTAA AGCTTTAGAA GACGAACCTA AAAACTCAGA ATTAGTAGGA
GTTTTAAGCA CAACTAACTA CAACGATAAA GAAAAAGTAC CAGATAAAAA ATTAGCACAA
CTTTTAGTTT TATTTAGTAC AGTAAACTTA GCAAACTCAA ACTTGGCATC AGAAGATATG
CTAGGGGATG CTTATCAGTA TTTAATAAAA CAATTTGCCG ACCAAGGTGG TAAGAAAGGG
GGAGAATTCT ATACTCCTAC TGAAGTTGTT AAGGTTATTA CAAATATTTT AAAACCACAA
GAAGGGGATA GAATATATGA CCCAACTTGT GGTTCAGGTG GTATGCTTAT TCAAAGTATA
GAGTATGTTA AAAAGCATGG TGGAAATCCT AAGAATTTAA GTTTATTTGG TCAAGAAATA
AACCTTTCAA CTTGGGCAAT TTGTAAAATG AATATGCTAT TTCATGGGGC AAAGGGAGCA
GATATTCAAA AAGGTGATAC TATAAGAGAA CCAAAACATA CAGAAGGTGG AGCATTAAAG
GTATTTGATA AGGTATTAGC AAACCCACCA TTCTCACTTA AAAACTGGGG AGCAGAAGAA
GCTTCATATG ATGCTTTTCA TAGATTTACT TATGGAATTC CACCAAAGTC ATATGGAGAT
TTAGCTTTTG TTGAACACAT GTTAGGAAGT TTAAATATGA AAGGTAAAAT GGCATCAGTA
GTTCCTCATG GAGTTTTATT TAGAGGGTCA GCTGAAGGAA AGATAAGAAA AGGATTCATA
GAAGATGACT TAATAGAGGC GGTAATAGGA CTTCCACAGA ACTTATTCTA TGGAACTGGA
ATACCAGCAG CTATATTAGT ACTTAATAAG GCGAAATCAG AAGAAAGAAA AAATAAAATA
TTATTTATAG ACGGAAGTAA TGATTTTGTA AAACAAGGAA ACAAAAATAA ATTAAGAGAG
GAAGATATAG AAAAAATAAT AACTGCATTT GATAAGTTTG AAGATGTAGA AAAATATGCA
AATGTAATAG ATTTAGAAAC AATAAAAGAA AATGACTATA ACTTAAATAT AAGTAGATAT
GTAGATACAA CTGAAGAAGA AGAACCAGTA GATATACAAA AAGTTATAGA TGAAATAAAA
GAATTAGAAA AAGAAGAAGA GAAAACAAAA GAGAAACTTA ATGGATACCT AAAAGAATTA
GGATTTGATG TTCTGTAA
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| Protein sequence | MAKLTLQELE STLWQCADIL RGELSAAEYK DYIFGMLFLK RLNDEFDEER EERRKEFLED
GLDKEEVIEL LEDPSIYETF FVPEQARWEK LRNLTLNIGP ELDKAFKALE DEPKNSELVG
VLSTTNYNDK EKVPDKKLAQ LLVLFSTVNL ANSNLASEDM LGDAYQYLIK QFADQGGKKG
GEFYTPTEVV KVITNILKPQ EGDRIYDPTC GSGGMLIQSI EYVKKHGGNP KNLSLFGQEI
NLSTWAICKM NMLFHGAKGA DIQKGDTIRE PKHTEGGALK VFDKVLANPP FSLKNWGAEE
ASYDAFHRFT YGIPPKSYGD LAFVEHMLGS LNMKGKMASV VPHGVLFRGS AEGKIRKGFI
EDDLIEAVIG LPQNLFYGTG IPAAILVLNK AKSEERKNKI LFIDGSNDFV KQGNKNKLRE
EDIEKIITAF DKFEDVEKYA NVIDLETIKE NDYNLNISRY VDTTEEEEPV DIQKVIDEIK
ELEKEEEKTK EKLNGYLKEL GFDVL
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