Gene CPF_2586 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_2586 
Symbol 
ID4203900 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand- 
Start bp2851514 
End bp2852152 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content30% 
IMG OID638083453 
Productredox-sensing transcriptional repressor Rex 
Protein accessionYP_696976 
Protein GI110799884 
COG category[R] General function prediction only 
COG ID[COG2344] AT-rich DNA-binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value0.0129291 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAAAGA AAAAAGGCAT ATCTATGGCT GTTATAAAAA GATTGCCTAA ATACCATAGA 
TATTTACAAG AATTAATGGA AAATGATGTT GATAGAATAT CTTCAAAAGA GTTAAGTGAA 
AAAATAGGCT TCACTGCTTC TCAAATAAGA CAGGATCTTA ATTGTTTTGG AGATTTTGGG 
CAACAGGGAT ATGGATATAA TGTAAAAGAG TTATACAATA ACATAGGGAG TATATTAGGA 
CTTACAAGAG ACTATAACAC AGTTATAATC GGAGCTGGTA ACATAGGGCA GGCTATTGCA 
AACTACAATA GTTTCAATAG ATTAGGCTTT AAATTAAAAG GTATTTTTGA TGCTAATCCA 
AGAATGTTTG GAATAAAAAT AAGAGATGTT GAGATACAAG ATGTTGAAAA ATTAAAAGAT 
TTCGTAAAAG AAAATGATAT TGAAATAGGT ATAATCTGTG TTCCAAGAAC AAATGCTCAA 
AAGGTATGTA ATGACCTTGT TGAAGGTGGA ATCAAAGGTA TATGGAACTT TGCGCCTATA 
GATCTTGAGG TGCCAAAAGA TATAAGAGTA GAGAATGTAC ATTTAAGTGA AAGTATGATG 
ACTTTAGTAT ATCTTTTAAA TCACAATGAT GTAAAATAA
 
Protein sequence
MEKKKGISMA VIKRLPKYHR YLQELMENDV DRISSKELSE KIGFTASQIR QDLNCFGDFG 
QQGYGYNVKE LYNNIGSILG LTRDYNTVII GAGNIGQAIA NYNSFNRLGF KLKGIFDANP 
RMFGIKIRDV EIQDVEKLKD FVKENDIEIG IICVPRTNAQ KVCNDLVEGG IKGIWNFAPI 
DLEVPKDIRV ENVHLSESMM TLVYLLNHND VK