Gene CPF_2581 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_2581 
Symbolhbd 
ID4202695 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand
Start bp2846494 
End bp2847342 
Gene Length849 bp 
Protein Length282 aa 
Translation table11 
GC content33% 
IMG OID638083448 
Product3-hydroxybutyryl-CoA dehydrogenase 
Protein accessionYP_696971 
Protein GI110798647 
COG category[I] Lipid transport and metabolism 
COG ID[COG1250] 3-hydroxyacyl-CoA dehydrogenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAAAGA TTTTTGTAAT TGGTGCAGGT ACAATGGGTG CTGGAATAGT TCAAGCATTT 
GCACAAAAAG GATATGAAGT TATCGTTAGA GATATCAAAG ACGAGTTTGT TGATAGAGGA
ATAGCTGGAA TCAACAAAGG TCTTACTAAA TTAGTTTCTA AAGGAAAAAT AACTGAAGAA
GATAAAGAAG CAGTATTATC AAAAATCACT GGAACTACTG ATTTAGGATT AGCTGCTGAC
TGTGATTTAG TTATAGAAGC TGCAGTTGAA AATATGGAAA TCAAAAAACA AATTTTCGCT
GAATTAGATA AAATCTGTAA AGAAGAAACT ATATTAGCTT CAAATACATC TTCATTATCA
ATAACAGAAG TAGCATCAGC TACAAACAGA CCTGATAGAG TTATAGGAAT GCATTTCTTT
AACCCTGCAA CAATAATGAA ACTTGTTGAA GTAATAAGAG GTATGGCTAC TTCACAAGAA
ACTTTTGACA AAGTAAAAGC TATGTCAGAA GCTATAGGAA AGACTCCAGT AGAAGTTGCT
GAAGCACCAG GATTTGTAGT TAATAGAATA CTTATCCCTA TGATAAACGA AGCTATTGGA
ATATATGCAG AAGGAATAGC TTCCGTTGAA GATATAGATA CTTCAATGAA ATTAGGAGCT
AATCATCCAA TGGGACCTTT AGCTTTAGGA GATTTAATAG GATTAGATGT TTGCTTAGCT
ATAATGGACG TATTATTTAA AGAAACTGGA GACAGTAAAT ACAGAGCTCA CAGTCTTTTA
AGAAAATATG TTAGAGCAGG ATGGTTAGGT AGAAAAACTG GTAGAGGATT CTACAACTAC
AACGCATAA
 
Protein sequence
MEKIFVIGAG TMGAGIVQAF AQKGYEVIVR DIKDEFVDRG IAGINKGLTK LVSKGKITEE 
DKEAVLSKIT GTTDLGLAAD CDLVIEAAVE NMEIKKQIFA ELDKICKEET ILASNTSSLS
ITEVASATNR PDRVIGMHFF NPATIMKLVE VIRGMATSQE TFDKVKAMSE AIGKTPVEVA
EAPGFVVNRI LIPMINEAIG IYAEGIASVE DIDTSMKLGA NHPMGPLALG DLIGLDVCLA
IMDVLFKETG DSKYRAHSLL RKYVRAGWLG RKTGRGFYNY NA