Gene CPF_2572 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_2572 
Symbol 
ID4202104 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand- 
Start bp2837652 
End bp2838074 
Gene Length423 bp 
Protein Length140 aa 
Translation table11 
GC content30% 
IMG OID638083439 
Productputative type IV pilin 
Protein accessionYP_696962 
Protein GI110800340 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG2165] Type II secretory pathway, pseudopilin PulG 
TIGRFAM ID[TIGR02532] prepilin-type N-terminal cleavage/methylation domain 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTATTAC TGAAAGCAAG TGCAATATGT GGAAAAGGAA ATGAAGGGAA AAGAAATAAG 
AAAGGGGGAT TCACATTAAT AGAATTAACT GTTGTTTTAG CTATTATGGC TATAATTTTA 
ATGGTTATAG CTCCAAATTT TTCATCTGTT AAGGATAGCG CTAAGGCAAA AGTAGATAAG 
CAAAATTGTG CTGCTATTGA AAGATCTGTG GAAATGTTAT TGGCAGAAGA TGCTATTTCA 
AGTAGTATTA CAAATATAAA AATAACTTCA AGTAATGGAA ATGTACAAAT TTCAGGAATA 
AGTGATGATA CGGGTAAAAG TAAGTTACAA GATTTACTTG AAGATTTAGA TAAGCCTCAA 
AGTGGAGAAT CTTATAATGT AGATATAGAA AATGGAAGAA AGGTTACGGT GTCTATAGTA 
TAA
 
Protein sequence
MLLLKASAIC GKGNEGKRNK KGGFTLIELT VVLAIMAIIL MVIAPNFSSV KDSAKAKVDK 
QNCAAIERSV EMLLAEDAIS SSITNIKITS SNGNVQISGI SDDTGKSKLQ DLLEDLDKPQ 
SGESYNVDIE NGRKVTVSIV