Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPF_2551 |
Symbol | |
ID | 4201121 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens ATCC 13124 |
Kingdom | Bacteria |
Replicon accession | NC_008261 |
Strand | - |
Start bp | 2810934 |
End bp | 2811902 |
Gene Length | 969 bp |
Protein Length | 322 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 638083418 |
Product | oligopeptide/dipeptide ABC transporter, ATP-binding protein |
Protein accession | YP_696941 |
Protein GI | 110798784 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG4608] ABC-type oligopeptide transport system, ATPase component |
TIGRFAM ID | [TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCAGATA ATACAGTTTT AAAAGTTGAA AATTTGAAAA AATACTTTCC GATTAAAGCA GGAGTTTTTT CTAAGACAGT TGGAAATGTA AAAGCTGTTG ATGGAGTAAG TTTTACTATA GATAAGGGTG AAACTTTAGG ATTAGTTGGA GAATCAGGTT GTGGAAAATC AACAACAGGA AGAGCAATTT TAAGATTATT TGAAAAAACA GATGGAAATG TATATTTTGA AGGAAAAGAT ATTTTTGCTC TTAAAAAGAA AGAACTTAGA GATTTAAGAC CAAAAATGCA AATGATATTC CAAGATCCAT ATTCATCATT AAATCCTAGA TTATCAGTAG ATTCTTTAGT AGGAGAGGCT CTTTTAAGTC ATAAGTTATG TAGCAAAGAT GAATTGCCTG AAAGAGTAGC TAAAACTATA GAAAGATGTG GACTTGCTAG ATATCATATG AAAAGATATC CACATGAATT CTCAGGTGGA CAAAGACAAA GAATAGGTAT AGCAAGAGCC TTAATTTTAA ATCCAAGTTT TATAGTTGCA GATGAACCTG TTTCAGCACT AGATGTTTCT ATACAATCAC AGATTGTAAA CTTAATGATG GACTTACAAG AAGAAATGGG ATTCTCATAT CTTTTCATAT CTCATGATTT AAGTATAGTA AAGCATATTT GTCATAAAAT AGGTGTAATG TACTTAGGTA GCTTAGTTGA ATTAGCTCCT AAAAATGAAC TTTATGATAA TCCATTGCAT CCATATACAA AGGCATTATT ATCAGCAGTT CCAATACCAG ACCCTACAAT TAAGAGGGAG AGAATAATAT TAAAGGGTGA TATTCCTTCA CCAGCTAATC CACCAAGTGG ATGTAAGTTC CATACTAGAT GTCCATATGC TATGGATAAA TGTAAGAAGG AAGCGCCAGA ATATAAGTGT GTTGGAAAAG ATCACTTTGT TGCATGTCAC TTAGTTTAA
|
Protein sequence | MADNTVLKVE NLKKYFPIKA GVFSKTVGNV KAVDGVSFTI DKGETLGLVG ESGCGKSTTG RAILRLFEKT DGNVYFEGKD IFALKKKELR DLRPKMQMIF QDPYSSLNPR LSVDSLVGEA LLSHKLCSKD ELPERVAKTI ERCGLARYHM KRYPHEFSGG QRQRIGIARA LILNPSFIVA DEPVSALDVS IQSQIVNLMM DLQEEMGFSY LFISHDLSIV KHICHKIGVM YLGSLVELAP KNELYDNPLH PYTKALLSAV PIPDPTIKRE RIILKGDIPS PANPPSGCKF HTRCPYAMDK CKKEAPEYKC VGKDHFVACH LV
|
| |